Quercus lobata (valley oak): 115981100
Help
Entry
115981100 CDS
T07350
Name
(RefSeq) peroxisome biogenesis protein 12
KO
K13345
peroxin-12
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115981100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115981100
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
115981100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-rbx1
PRIMA1
Motif
Other DBs
NCBI-GeneID:
115981100
NCBI-ProteinID:
XP_030959146
LinkDB
All DBs
Position
3:29767888..29779033
Genome browser
AA seq
392 aa
AA seq
DB search
MLFQVGGQGSRPTFFEMSAAQQLPASLRAALTYSFGVLALRRPMFHRVLDYEDEFFAFLM
LILETHSLRTTDASFSESLYGLRRRAVKIKVKKDDARLMSGDGINHSGLEKRQKVLSVVF
LVVLPYFKSKLHSIYNKEREARLQASLWGHDDEGFDDTEYIGGEDSLASSGNLEAEASIR
TRLTKRIQKIVGTCYPWIHASSEGVSFAYQLLYLLDATGFYSLGLHALGIQVCRATGQEL
MDTSSRISKIRSRERERLRGPPWLKAVQGALLSCMYTALDYAQTGLIAAVFFFKMMEWWY
QSAEERMSAPTVYPPPPPPPPPKVAEEGIPLPPDRTICPLCSQKRANPSVVTVSGFVFCY
ACIFKYVSQYKRCPITLMPATGDHIRRLFHDV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaagtaggagggcaagggagccggccgaccttcttcgagatgtcggcggct
cagcagctcccagccagcctccgcgccgctctcacctattctttcggcgtattggcttta
agaagaccgatgttccacagggttttagactatgaagatgaattctttgctttcctcatg
ctcattctcgaaactcacagtttacgcaccacagatgcatctttttctgaatctctatat
ggcttacggaggagagctgtgaagataaaagtaaagaaagatgatgctcgattgatgtca
ggtgatgggattaatcactctgggttagagaagcgccaaaaagttctttcagttgtgttt
ctggttgtgctgccgtattttaagtcaaagttgcattcaatatacaataaagaaagggaa
gccaggcttcaagcaagtttatggggacatgatgatgaaggatttgatgatactgagtat
ataggaggggaggattctcttgcttcaagcggaaatttggaagcagaagcatcaattagg
acacgcttgacaaagaggattcagaaaattgtaggcacctgctatccatggatacatgct
agtagtgaaggagtatcttttgcttatcagctgttatatttgttggatgctactggattc
tattcgttaggactacatgcacttgggattcaagtttgccgagctacagggcaagagctg
atggatacttcttctagaatttcaaagataagaagccgtgaacgtgaaagacttcgtggg
ccaccatggctgaaggcagtacagggtgcactgctcagctgtatgtatacggcacttgat
tatgcacaaacaggattaattgcagcagtgttcttctttaaaatgatggaatggtggtac
caatctgctgaggagagaatgtcagctccaactgtgtaccccccaccacctcctcctcct
ccaccaaaggttgctgaagagggtattccactgccacctgaccgaacaatttgtcctttg
tgctcacagaagcgtgcgaatccatctgtagttacagtttcagggtttgtcttctgttac
gcatgcatatttaagtatgtttctcagtataaacggtgcccaatcacattaatgcctgca
actggtgaccatataaggagactctttcatgatgtatag
DBGET
integrated database retrieval system