Quercus lobata (valley oak): 115981311
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Entry
115981311 CDS
T07350
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03015
mRNA surveillance pathway
qlo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115981311
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115981311
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qlo01009
]
115981311
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115981311
03036 Chromosome and associated proteins [BR:
qlo03036
]
115981311
Protein phosphatases and associated proteins [BR:
qlo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115981311
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115981311
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115981311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
Phage_Inh_C
P2R3B_EF-hand
DUF929
DUF4187
Motif
Other DBs
NCBI-GeneID:
115981311
NCBI-ProteinID:
XP_030959324
LinkDB
All DBs
Position
3:complement(29898744..29921257)
Genome browser
AA seq
541 aa
AA seq
DB search
MTTSMEIVIDAASFDADLLQLSEVSPLALKSNPVFTEKLFEQWLSLPDSIRQVTLLLNEA
KAGGPLNVPGNSSSPRASTSNSLPSMFPAGSAPPLSPRSSSGSPRIMKQRPGPSILSSPL
KVVSEPVKELIPQFYFQNGRPPPNELKEQCLMRINRFFHGHLDGLQMHEFKLVTKEVCKL
PSFFSTALFRKIDVNGTGLVTRDAFVQYWVIGNKLTMDIATQMYTILKQPDIKFLTQDDF
KPVLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGQLTLRELKRGNLIDA
MQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDR
IFSQVSRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGILTRNELQF
FYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENESYITLHDLKGCRLSGSVFNILFNLN
KFMAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAP
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgagcatggagatcgtgatcgatgcggcgtcgttcgacgccgacctcttgcag
ctctccgaggtttctcctttggcactcaaatccaatccggtctttaccgagaagctcttc
gagcaatggctttcgcttcctgattctattcgtcaggtaacattattgctcaatgaagca
aaggcgggtggtcccttgaacgtccctggaaattcttctagtccacgtgcttccacaagc
aattctttgccttctatgtttcctgcaggcagtgctcctccactttcaccgaggagttca
tctggttcccctcggataatgaaacagaggcctggaccttctattttaagttcacccctg
aaagtggttagtgagccggttaaagaattgatacctcagttttactttcaaaatggtcgt
ccaccaccaaatgaattaaaagagcaatgcttaatgagaattaatcggtttttccatggg
cacttggatggactccagatgcatgaatttaaattagtaactaaggaagtctgcaagcta
ccatcattcttctccacggccctttttagaaagattgacgttaatggcactggtttggtg
acaagggatgcatttgttcagtactgggtcattggaaataagttgacaatggatatagca
acccaaatgtataccatcttgaagcaaccggatatcaaattccttactcaggatgacttc
aaacctgttcttcgtgaacttttagcaactcatccagggttggagttcttacagagcaca
ccagagtttcaggaaagatatgctgaaactgtaatatacagaatattttactacataaat
agatcggggaatggtcaacttacactcagggagctgaaacgtggaaacttaattgatgca
atgcaacacgcagatgaggaagaagacatcaataaagttttgaggtacttctcgtatgaa
catttttatgttatatactgcaagttttgggagctggatacggatcatgattttttgatc
gacaaagagaaccttatcagatatggtaaccatgcgcttacctaccggattgttgataga
atattttctcaggtttcaaggaagttcactagtaaggttgaggggaagatggggtatgaa
gattttgtgtacttcatactgtcagaggaggataaatcatctgaacctagtctcgagtat
tggttcaaatgcatagacctggatggaaatgggattctgacacggaatgagctgcaattc
ttctatgaggagcagttgcatcgaatggaatgcatggcccaagagcctgtgctctttgag
gatatattgtgccaaataattgacatgattggacctgagaatgagagctatatcacactg
catgacctgaaaggttgtagactttcgggaagcgtattcaatatccttttcaaccttaat
aaatttatggcctttgaaactcgtgatccatttctcattcgtcaggaacgagaaaatcca
acattgacagagtgggatcgctttgcacatagagaatacatcaggctttcaatggaggaa
gatgttgaagatgcctctaatggaagtgcagaagtttgggatgaatcacttgaggctcct
ttctga
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