KEGG   Quercus lobata (valley oak): 115981480
Entry
115981480         CDS       T07350                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115981480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qlo03041]
    115981480
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115981480
Spliceosome [BR:qlo03041]
 Complex B
  Other components
   Prp19 complex
    115981480
 Complex C
   Prp19-CDC5 complex
    115981480
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    115981480
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 115981480
NCBI-ProteinID: XP_030959505
UniProt: A0A7N2L6Z5
LinkDB
Position
3:complement(30814783..30826996)
AA seq 998 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDNRHRKRKRRGIDYNAEIPFEKKAPAGFFDVSDENRPVDLVKFPV
TIEELEGKRRNDVEAQLRKQDIAKNKIAQRQDAPSSILQANKMNDPETVRKRSKLMLPAP
QISDHELEEIAKMGYASDLLAGSEEVSEGSGATRALLANYAQTPQPGMTPLRTPQRTPAG
KGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKRELQTPNPMLTPSATPGG
AGLTPRIGMTPSRDGFSFSMTPKGTPLRDELHINEDMDMHESVKLEQRRQADLRRNLRSG
LTNLPQPKNDYQIVMQPVPEDNEEQEEKIEEDMSDRLARERAEEEAREQALLRKRSKVLQ
RELPRPPAASLDLIRNSLMRADGDKSSFVPPTSIEQADEIIRKELLALLDHDNAKYPVDK
KMNKEKKKGSKRSADTTYVPEIEDFEEDELKEADYLIKEEAQYLRVAMGHEDQSLDEFVE
AHKTCLGDLMYFPTRSAYGLSSVAGNMEKLAALQNEFDNVKRKMDGDKAKAETLGKKVEI
LTQGYEKRARMGLWPQIEATIKLMDTAATELECFKALQKQEQLAASYRINGIREEVQKQK
ELERTLQGRYGELVAELERVQSLMEKYRVQAQKEEEIAAKNRALELAEAEEGKTVVPSTE
TPVPISSDEQLGSSVPVGPSHDENEGQQVDASRSPKTDMDVDIEKEHETLCIDTTVVQDN
GPEGSDIQLSESERNPGGVLDTVVENDKMITNSVDDAAGDSSTSTEVAKEAQDIGDQLNV
VEAGKLDGVLTKQEDQVSEASGNDDFGSGDAMQVSGDK
NT seq 2997 nt   +upstreamnt  +downstreamnt
atgaggataatgataaaaggaggggtgtggaaaaacaccgaggatgagatcttgaaagcg
gcggtcatgaaatatggcaagaatcaatgggctcgaatctcttctcttctcgtccgcaag
tctgccaaacagtgcaaggctcgctggtacgagtggctcgacccctccatcaaaaagact
gagtggacaagagaagaggatgagaaactgcttcatcttgctaaactcatgcccacacaa
tggagaacaattgcaccaattgttggtcgtactccatcgcaatgccttgagcggtatgag
aaactccttgatgcagcctgcgctaaggacgagaactatgaaccaggggatgaccctcgg
aaattgcgtcctggagagattgacccaaaccccgagtccaagccagcacgtccagatcct
gttgatatggatgaggatgagaaggaaatgctttctgaagcacgagctcggttagccaac
acaaagggaaagaaggcaaagcggaaagctagggagaagcagcttgaagaggctaggaga
cttgcttctttacagaagaggagagagttgaaggcagctgggattgataataggcaccga
aagaggaaaagaaggggaatagactataacgcggagattccatttgagaagaaggctcct
gctggattttttgatgtctccgatgaaaataggcctgtagatctggtcaaatttccggtc
acaattgaagaacttgaagggaaaagaagaaatgatgtggaagcacaattgagaaaacag
gatattgcgaagaacaaaattgcgcaaaggcaggatgctccgtcatctatattgcaagcc
aacaagatgaatgatccggaaacagttaggaagaggtcgaaacttatgcttcctgctcca
cagatttcggatcatgagttggaggagattgcaaagatgggatatgctagtgatcttctt
gcagggagtgaggaagttagtgaaggaagtggtgcaacacgtgctcttcttgcaaattat
gcacagacaccacagccaggaatgacgcctttacgaactccccaaagaacacctgctggt
aagggtgatgctattatgatggaagcagaaaatctagccaggttgagagagtctcagaca
ccattattaggaggagaaaatccagagttgcatccttctgatttttcaggggtcactcct
aagaaacgggagttgcagacaccaaatccgatgctgactccatcagcaactcctggaggt
gctggactaactcctagaattggcatgacaccatcaagggatggcttttcttttagtatg
acccctaaaggaactccactcagggatgaacttcatattaatgaagacatggatatgcat
gaatctgtgaaacttgaacaacgaaggcaagctgatttgagaaggaacttgcggtcgggt
ttaaccaatcttccacagcccaagaatgactaccagatagttatgcaaccggttccggaa
gataatgaagaacaggaggagaagattgaagaagatatgtctgataggttagctagagaa
agagctgaggaagaggcacgggagcaggcattacttaggaaaagatctaaagtactgcaa
agggagcttcctagacctcctgcagcttctttggatctaattagaaattctctgatgaga
gcagatggagacaagagttcctttgttcctcccacttctatcgagcaggcagatgaaatt
ataagaaaggagcttctagccctgctagatcatgataatgcaaaatatcctgttgacaaa
aaaatgaataaggagaaaaagaaaggttccaagcgttctgcagatacaacttatgtccca
gaaatagaagattttgaagaagatgagcttaaagaggctgattatctgataaaggaagag
gcacagtatcttcgtgtggcaatggggcatgaggatcaatccctagatgaatttgttgaa
gcacacaaaacttgtctaggtgatctcatgtacttccccacccgtagtgcttatggtctc
tcaagtgttgctggaaacatggaaaaactggcggccttgcagaatgaatttgacaatgtg
aaaaggaagatggatggagataaagctaaggcagaaacccttgggaagaaggttgaaatt
ctcacacaaggttatgagaaacgggctagaatgggtctctggccacaaattgaggcaacc
ataaagctgatggacactgctgcaacagaacttgagtgcttcaaagctttacaaaagcaa
gagcaattagcagcgtcgtaccgtataaatggtatccgggaggaagttcagaaacaaaaa
gagctggagcgaactttacaggggcggtatggagagcttgtagcagagctggaaagggta
caaagcctcatggaaaaatacagagtacaagcacaaaaggaagaagaaattgcagccaag
aatcgtgctctagagttggctgaggctgaagaaggtaagactgttgtgccaagcacagag
actcctgtgcctatatcctctgatgaacaacttggaagctctgttccagttggaccatcc
cacgatgaaaacgaaggacagcaagtggatgcttcacgaagcccaaaaacggatatggat
gttgatatcgagaaagagcatgaaacactgtgcatagacacaacagttgttcaagataat
ggtccggaaggttctgatattcagctctcagagtctgaaagaaaccctggtggagttctg
gacacggttgtggagaatgataagatgattaccaactcggttgatgatgcggctggtgat
agtagcacgagtactgaggttgccaaggaggctcaggatattggggatcagctgaatgtt
gtggaagctggaaaactggatggtgtcttgaccaagcaagaagaccaagtctcagaagca
agtggcaatgatgatttcggcagtggagatgccatgcaagtttctggtgacaaatag

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