Quercus lobata (valley oak): 115981489
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Entry
115981489 CDS
T07350
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 2-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115981489
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qlo01009
]
115981489
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115981489
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115981489
03041 Spliceosome [BR:
qlo03041
]
115981489
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
115981489
Protein phosphatases and associated proteins [BR:
qlo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
115981489
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115981489
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
115981489
Spliceosome [BR:
qlo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115981489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
115981489
NCBI-ProteinID:
XP_030959521
LinkDB
All DBs
Position
3:complement(31629359..31641723)
Genome browser
AA seq
343 aa
AA seq
DB search
MEQPVLDDIINRLLEVRGRPGKQVQLSESEIRQLCSASREIFLQQPNLLDLQAPIKICGD
IHGQYSDLLRLFEYGGLPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN
HECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHDLD
QIRNLQRPTDVPDTGLLCDLLWSDPSKDIKGWGMNDRGVSFTFGDDKVSEFLQKHDLDLI
CRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDDTLMCSFQILKPADKSKR
FNFGSTTTSKPGNSLAGMNMFGSTTTTKPGNSPTGVKSFLGAM
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaccagttctggacgacatcatcaatcgtcttctggaagtccgaggtcgaccg
ggcaagcaggtccagctctccgagtccgagatccgacaactctgtagcgcttccagagag
attttcttgcaacagcctaacctgttggaccttcaagcgcctatcaagatttgtggtgac
atacatggtcaatattctgatcttttaaggctttttgagtatggaggattacctcctaat
gccaactacttatttttgggggattatgtggatcgaggcaagcagagtttagaaacaatt
tgtctacttctagcatataaaataaaatatcctgaaaactttttcctcttgaggggaaac
cacgaatgtgcttcgatcaatcgtatatacggtttttacgatgaatgtaagagaagattt
aatgtacggttatggaagatattcacagattgctttaactgtctgccagtggcagcccta
attgatgaaaagattctctgcatgcatgggggcctctctcctgatctacatgatttggat
cagattagaaatttgcagcggccaactgatgtaccagacacaggtttgctctgtgatctt
ctctggtccgatcccagtaaagatattaaaggttggggaatgaatgatagaggagtttca
tttacatttggtgatgacaaggtgtctgagtttcttcagaagcatgatttggatctcatt
tgtcgtgctcaccaggttgtagaggatggatatgagttctttgctgagcgacaacttgta
actatattttccgcacctaattactgtggggagtttgacaatgctggtgccatgatgagt
gtggacgacacgctaatgtgctccttccaaatattaaagcctgcagataaaagcaaaagg
ttcaactttgggagcacaactacatctaaacctggaaattctctagcagggatgaatatg
tttgggagcacgactacaactaagcctggaaactcaccaactggagtcaagtccttcctt
ggggcaatgtga
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