Quercus lobata (valley oak): 115981556
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Entry
115981556 CDS
T07350
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115981556
Enzymes [BR:
qlo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115981556
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115981556
NCBI-ProteinID:
XP_030959634
UniProt:
A0A7N2L967
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Position
3:56011782..56013639
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AA seq
402 aa
AA seq
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MGIPLILLVLLALLAPTCISSSIIQNPELVVQAVHKSINASRRDLGYFSCGSGNPIDDCW
RCDPNWEKNRQRLADCAIGFGKHATGGRDGKIYVVTDPSDDNPVNPKIGTLRHAVIQNEP
LWIIFKHDMVIKLKEELLMNSYKTIDGRGANVHIAGGPCITIQYASNIIIHGLNIHDCKQ
GGNAYVRDSPDHYGWRTISDGDGVSIFGGSHIWVDHCSLANCHDGLIDAIHGSTAITISN
NYMTHHNKVMLLGHSDSYTQDKFMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYSHWE
MYAIGGSAAPTINSQGNRFLAPNDNYNKEITKHEDAPQSEWKKWNWRSEGDLMVNGAFFT
PSGAGVSSSYAKASSLSARPSSLVSTITAGAGILKCKKDSRC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggaattccactcattcttttggtacttttggctcttctagctccaacctgcatatcc
tcttcaataatccaaaaccctgaactagtagtacaagcagtacacaagagcatcaatgcc
tctaggagggatttaggctatttctcttgtggttctgggaatccaattgatgattgctgg
aggtgtgatccgaattgggaaaagaaccggcaacgcctagccgattgtgcaattgggttt
ggtaagcatgccactggaggcagagatggtaaaatatatgtggtcacagaccctagtgat
gataatccagtgaaccccaagataggcactcttagacatgctgtgattcaaaatgaacca
ctatggatcattttcaaacatgacatggtgatcaagctaaaggaagagcttctcatgaat
tcatataagacaattgatggtcgtggtgcaaatgtgcacattgctggcggtccatgcatt
actatacaatatgcatccaacattattatccacggcctaaatatacatgactgcaagcaa
ggtgggaatgcttatgtgagggactcgcctgatcattatgggtggaggactatatcggat
ggtgatggggtttcaatttttggaggaagtcacatttgggtggatcattgttctttagct
aattgtcatgatgggctgattgatgccattcatggatccacagccatcaccatctctaac
aattacatgacccaccataacaaagtcatgctcttgggtcatagtgactcgtacacacaa
gacaaattcatgcaagtcactatagctttcaatcattttggagaagggcttgtgcagagg
atgccaagatgtagacatggctatttccatgtggtgaacaatgactactctcattgggaa
atgtatgcaattggtggcagtgcagctcctactattaatagccaagggaatagattcctt
gctcccaatgacaattataacaaggagattactaaacatgaagatgcaccacaaagcgag
tggaagaaatggaattggaggtccgaaggagatttgatggtgaatggtgctttcttcacg
ccttctggggccggagtgtcttctagctacgccaaggcatctagcttgagtgcaagacca
tcttctcttgtgagtactatcacagccggagctggtatacttaagtgcaagaaggactcg
cgttgttga
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