Quercus lobata (valley oak): 115981557
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Entry
115981557 CDS
T07350
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115981557
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
115981557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
115981557
NCBI-ProteinID:
XP_030959635
LinkDB
All DBs
Position
3:34833139..34880591
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AA seq
1617 aa
AA seq
DB search
MDQTQNQAQRSVPTAAPASASSSASRAYQFHPARAAIVDLFNLYLGRSSRQKPEDSIREP
PNKTQKRVLALNRELPPRNEQFLLDFEQLQSQFSDQEQLRAVTESVLISLVVQCSGHAPR
AEFLLFALQSLCSIGYINWDTLLPQLLSSISSAEMTVGQGSQVMPAVSSTSLSQSGMLPP
SSSIPNSSNFQSSNPASPLPSVHGIGSPAQSMTEPPSCATLSPAKSSDISCNGQQSTARV
NSSIRDNAVSSLRQLCCKIILAGLEFNLKPVTHAEIFYHMLNWLVNWDQRQQGIDESDAV
KSWRPDKALIEWLHSCLDVIWLLVEEDKCRVPFYELLRSGVQFIENIPDDEALFTLILEI
HRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTAPNIAGEAVANMRYSPITYPSVLGEPLH
GEDLAMSIQKGSLDWERALRCIRHALRTTPSPDWWKRVLLVAPSYKNPQPPTPGAVFTSE
MICEATIDRIIELLKLTNSEINCWQEWLILSDIFFFLTKSGCIDFVDFVDKLLSRVTEGD
PHILKTNHVTLLLAQVIRAELVMNALNSDPRKVETTRKLISFHREERSPDPNNPQSILLD
FISSCQNLRIWSLNTATRDYLNNEQLQKGKQIDEWWRQASKGDRIMDYMNMDDRSIGMFW
VVSYTMAQPACETVMNWLNSAGVTDLLPGSNLQSNERVMVMREVSPLPMSLLSGFSMNLC
LKLAFQMEESLFAGQVVPSIAMVETYTRLLLISPHSLFRSHFSNLAQRNPALLSKPGVTL
LVLEILNYRLLPLYRYQGKSKALMYDVTKIISARKGKRGEHRVFRLAENLCMNLILSLRD
FFSVKREGKGPTEFTETLNRITIITLAITIKTRGVADADHLLYLQTMLEQIMATSQHTWS
EKTLRYFPSALRDALMGRMDKRSAVIQAWQQVETTVINQCKQLLSPSADPSYVTTYVSHS
FPQHRNCLCAGAWVLMHGHPESINSANLARVLREFSPEEVTANIYQMVDVLLHHIQMELQ
HGHPLQDLLLKACANLAFFVWNHELLPFDILLLALIDRDEDPHALHIVINLLERQELQQR
VKLYCINHNPPEHWLHSGMFKRVELQKALGNHLSWKDRYPTFFDDVAARLLPVIPLIVYR
LIENDAIDPADRLLAMYSPFLAYHPLKFTFVRDILAYFYGHLPAKLIVRILKVLDLKKIS
FSESFAQHITSQNPVCPPMDYFATLLLGLVNNVIPPLHNNSKSGSMGEHLSNSVRAPLNK
TPATSQSGLGNASEGQKAFYQIQDPGTYTQLVLETAVIELLSLPVSAFQIVSSLVQIVVN
IQPTLIQSSNGLHGASNGVGQASVLPTSPSGGSTDSLSAGRSTTSVSGINTSNIVSRSGY
TCQQLSCLLIQACGLLLAQLPPDFHVQLYIETSRIIKESWWLTDGKRSLGELDSAVGYAL
LDPSWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPVTSVAMLRIVFRIM
GPLLPRLANAHSLFNKTLSLLLSVMVDVFGRNSQPSIPVEASEIADLIDFLHHVIHYEGQ
GGPVQANSKPRPEALALCGRASESLCPDVQHLLSHLKPDVNSSIYAATHPKLVQNPS
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaacccaaaaccaagctcagagatcagttccgactgcggctccagcttcagcc
tcctcctcagcttctcgtgcctaccagttccaccctgctcgcgctgctatcgtcgatctc
ttcaacctctacttaggcagaagtagtcgccagaaacctgaagattctattcgagaacct
ccgaacaagacacaaaagcgtgtgcttgcactaaacagggagcttcctcctcggaatgag
cagttcctcttagattttgaacaacttcaaagccagttttctgaccaagagcaattgcgt
gctgtgacagaatctgttcttatatctctggttgtgcagtgtagtggtcatgcaccacgg
gctgaatttcttctctttgctttacagagcttgtgtagtataggttacattaactgggat
actcttttgccacaacttctttcatcaatctcctctgcagaaatgacagtgggtcagggg
agtcaagtgatgccagctgtttcatctacaagtttatcacagtctgggatgcttccacct
tcaagctcaattcccaattcttctaattttcagtcttcaaatccggcatctccattacct
tcagttcatggtattgggtcccctgcccaatcaatgactgaaccaccatcatgtgcaact
ctgtcaccagccaaatcatctgatatttcctgtaatggacagcaatctacagccagagta
aattcatctataagagataatgctgtaagcagtctacgtcagctgtgttgcaagattatt
ttggctggtcttgaatttaatttaaaaccagtgactcatgcagaaattttctaccatatg
ctgaattggctggttaattgggatcaaagacaacaggggattgatgaatctgatgcagtg
aaatcttggagacctgacaaggctcttattgaatggctgcacagttgtttggatgtgatt
tggcttttggttgaagaggataaatgccgagtacccttctatgaattattgcggagtggt
gtgcagttcatagaaaacatacctgatgatgaagctttatttacacttatcttagagatc
catcggaggcgagatatgatggctatgcacatgcaaatgctagatcaacacttgcattgc
cctacatttggtactcatcggattctgtctcaaacagctcctaatattgcaggcgaagca
gtagcaaacatgcgatattcgccaatcacatatccaagtgtacttggagaaccattgcat
ggagaggatcttgcaatgtctattcagaagggaagtttggactgggagagagctttgcgt
tgtataaggcatgctcttcgcactactccatcacctgattggtggaagcgtgtgcttctt
gtggctccatcctataagaatcctcaaccgccaactcctggtgctgtttttacttctgaa
atgatttgtgaggcaactattgatagaattattgaactattgaagttgacaaactcagag
ataaattgctggcaggagtggcttatcctttcagatatcttcttttttcttacgaaaagt
gggtgtattgactttgttgattttgtggacaagctactttcacgggttacagagggtgat
ccacacattcttaagacaaatcacgttactttgctgcttgcacaagttataagggctgag
cttgtgatgaatgctttgaattcagatcctagaaaggtggaaacgaccagaaaactaata
tcatttcatcgagaagaaagaagccctgatcctaataatcctcaaagtatcctgcttgat
tttataagtagttgtcagaatttacgtatttggtcactgaacacagccaccagggattat
ttgaataatgaacagctccagaagggaaagcaaatagatgaatggtggaggcaagcaagc
aaaggtgaccgcattatggattacatgaatatggatgatagatcaattgggatgttttgg
gttgtgtcttataccatggcacaaccagcttgtgaaacggtaatgaattggttaaactct
gctggagttacagatttgttaccaggatcaaatctacagtccaacgagagggtaatggtt
atgcgggaagtaagccccttgccaatgtcattattatctggcttttccatgaacctatgt
ttgaagcttgcctttcaaatggaagaaagtttatttgctgggcaggttgtgcctagcatc
gcaatggttgaaacatatactagattgctgctcatttcacctcactcattatttcgttca
cacttcagcaatttggcacaaaggaacccagcattattgagcaagcctggtgtaactctt
ttggtgcttgaaattttgaattaccgtttgctgccattatataggtaccaaggaaaaagc
aaagccttgatgtatgatgtcacaaaaataatttctgcaagaaaagggaaacgtggagag
catcgtgtatttagattggctgaaaacttgtgcatgaatcttattttgtcactcagagat
tttttctcagtgaaaagggaagggaagggtcctactgaattcactgaaactttaaatagg
ataaccattataacacttgccatcacgattaaaacacgtggagttgcggatgcagatcac
ctgctttatcttcaaactatgttagaacagataatggcaactagtcaacatacatggtca
gagaaaacactgcgctactttccttctgctcttcgtgatgccttaatggggcggatggat
aaaaggagcgcggtgattcaagcatggcaacaggtggaaaccactgtaattaatcaatgc
aagcaactcctttcaccgtcggctgatccttcttatgttacaacctatgtcagtcatagt
tttcctcaacaccgaaactgtctttgtgccggtgcttgggtactaatgcatgggcaccca
gagagcataaacagtgcaaacttggcacgtgtcttgagggagttttccccagaagaagtt
acagctaatatttaccaaatggtggacgtgctacttcatcatattcaaatggaacttcag
catggacatcccttacaggaccttttgttaaaagcttgtgcaaaccttgcattttttgtt
tggaaccatgagttgcttccctttgatattttgcttctggcacttattgaccgtgatgaa
gatccccatgctttgcatatagtgatcaatttacttgagaggcaagagctccaacaaaga
gtaaaattatattgtataaatcataatcctccagagcattggcttcactctggaatgttc
aagcgagttgaattgcaaaaggctctcgggaatcatctctcatggaaggacaggtatccc
acattctttgatgatgttgcagcgcgtttgcttccagtcatccccttaattgtttataga
cttatcgagaatgatgccatagatccagctgacagacttcttgccatgtattctccattt
cttgcttaccacccgctaaaatttacatttgttcgtgatatacttgcgtatttctatggt
catcttcctgcaaagctcatagtccggatattgaaggttcttgatctcaagaagatatct
ttttctgagtcattcgcacagcacatcacttcacaaaatcctgtgtgcccacctatggac
tattttgcgactctcttattgggacttgtgaataatgttataccgccattacataacaac
tcgaaatctggatcaatgggagaacatttaagtaattcagtgcgtgctccacttaataag
actccagcaacatctcagtctgggctgggaaatgcttctgagggccagaaagcattttat
caaattcaggatcctggcacctacactcaattggtccttgaaacagctgtcatagaatta
ctctctctccctgtgtctgcattccagattgtgtcttcattggtccagatagttgtcaat
atacaaccaacattaattcaatccagcaatggtctgcatggagcttcaaatggtgttggg
caagcttccgtattgccaacatccccttcaggaggaagcacagattccttgagtgctggc
agatcaactacatcggtttcaggaataaatacctctaacattgtttctcgaagtggttat
acgtgccaacaactatcttgcttactgatccaagcttgtggtctcctactggctcagctt
cctcctgatttccacgtgcaactttatatagagacatcacgtataataaaagagagttgg
tggctcactgatggcaaaaggtcactgggagaactagactctgctgttggctatgctttg
ttggatccatcatgggctgctcaagacaatacctcaacagccatcggtaatatagttgcc
cttcttcattcttttttcagtaaccttccacaggaatggctagaagggactcatgtcatc
attaaacatctcaggccagtgacatcagttgcaatgttgagaatagtgttccgtataatg
ggtccattgctcccaaggcttgccaatgctcactctctcttcaataagactctctcatta
cttttaagtgtaatggttgatgtgtttgggaggaattcacaaccatcaattcctgttgaa
gcgtcggaaatagcagatctcattgacttcctccatcatgttatccattatgaagggcag
ggagggcctgtgcaagccaacagcaagcctcgaccagaggcactggctctctgtgggaga
gcatcagaaagtttatgtccggatgttcagcaccttctgtcccacctaaaacctgatgta
aattcttccatttatgctgctacccatccaaagctggtccagaatccgtcataa
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integrated database retrieval system
