Quercus lobata (valley oak): 115981650 Help Entry 115981650         CDS       T07350                                  Name (RefSeq) THO complex subunit 2   KO K12879   THO complex subunit 2 Organism qlo  Quercus lobata (valley oak) Pathway qlo03013   Nucleocytoplasmic transport qlo03040   Spliceosome Brite KEGG Orthology (KO) [BR:qlo00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     115981650   09122 Translation    03013 Nucleocytoplasmic transport     115981650  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:qlo03019]     115981650    03041 Spliceosome [BR:qlo03041]     115981650 Messenger RNA biogenesis [BR:qlo03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      115981650 Spliceosome [BR:qlo03041]  Complex C   Other components    EJC/TREX     115981650  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     115981650 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 ABPF_N Motif Other DBs NCBI-GeneID:  115981650 NCBI-ProteinID:  XP_030959797 LinkDB All DBs Position 3:38312266..38373320 Genome browser AA seq 1885 aa AA seqDB search MSLPSIDCIYVTEELVRELKNGNPSFKLSEPVPMLRFLYELCWTLVRGELPFQKCKAALE SVEFVDGLSREELGSCLADIVTQMAQDIAMPGEYRSRLTKLAKWMADSALVPLRLFQERC EEEFLWEAEMIKIKAQDLKNKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAS TQNVSAATIGIIKSLIGHFDLDPNRAFDIVLECFELQPDNKIFLELIPIFPKSHASQILG FKFQYYQRMEVNSPVPFGLYKLAALLVKEEFIDLDSIYAHLLPKDDDAFDHYNAFCAKRL DEANKIGKINLAATGKDLMDDEKQGDVTIDLFSALDMETEAVVERFPELENNQTLGLLTG FLCVDDWYHAHILFGRLSPLNPVEHIQICNSLFRLIEKSISSAYDIVHQAHFQSFGSSSG ASIDAMDVANSSVRGSFIDLPSELFQMLSCAGPYLYRDTLLLQKVCRVLRGYYLSALEHV GNGDGALNPEIVIGGNRDPRLHLKQARSRIEEALGTCLLPSLQLIPANPAVGQEIWEVMN LLPYEARYRLYGEWEKDDEQIPMVLSARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHA NPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDVLEYVVIERLAQGGRDKLKDDGLN LSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELLLLQELIQQMANVQYTE NLTEEQLDAMAGSETLRYQATSFGVTRNNKALIKSTNRLRDSLLPKDEPKLAVPLLLLIA QHRSLVVINADAPYIKMVSEQFDRCHGTLLQYVEFLCSALTPASAYAQMIPTLDDLVHLY HLDPEVAFLIYRPVMRLFKCQGSSDVFWPLDDSDATNISTTNLDSEPTEYSGNVVLDLGS SKKIIWSDLLDTVRTMLPSKAWNSLSPDLYATFWGLTLYDLYVPRNRYESEISKQHAALK ALEEISDNSSSAITKRKKDKERIQESLDRLTSELRKHEENVTSVRRRLSHEKDKWWSSCP DTSKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPM ICCCTEYEAGRLGRFLCETLKIAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQF VRVHWKWSQRITRLLIQCLESTEYMEIRNALIMLTRISTVFPVTRKTGINLEKRVAKIKS DEREDLKVLATGVAAALAARKPSWVTDEEFGNGYLDSKPAPSLSSKSASGNSVPAQSSSA IKLSQSEPAGGKTVATATQHSDSVKDHILKSKPADGRLERTESVTIVKPDPGIVKLKVGL LVNGADAQSSLPSATGQSGSGTSRSTENPKQVDESTRTLDENMAKVAPKNSTEPELRTTA KRSTIATSLTKPPKQDLAKDDSRSGKAVGKTSGPSSGDKDLSTHASEGRQVGPTNASSAV TANGNTVSASVKGSTPSARAPSDSHGNELKAESGASKSSDMRVSSVKEDGAEVSDVRPPS RLVHSPRHDNSANASKSSDKLQKRASPAEEPDRLGKRRKGDSETRDLEGDVRFSDRERSV DHGIEEHRPTDKPLDRSKDKSNERYDRDYRERVDRPDKSRGDDVFAEKSRDRSIERYGRE RSVERVQERGTDRSFDRLSDKAKDDRNKDDRSKLRYNDTSVEKSHVDDRFHGQNLPPPPP LPPNMVPQSVNTGRRDEDADRRFGATRHTQRLSPRHEEKERRRSEENSVVLLEDAKRRRD DDLRERKREEREVLSMKAEEREREREREREREKANLLKDDMDAGAASKRRKLKREHLPSG EAGEYSPVAPPPPPLGVSAQSYEGRDRGERKGAMIQRAGYLDEPNLRIHGKEVAGKMTRR ETDQMYDREWDDDKRRVEQKRRHRK NT seq 5658 nt NT seq  +upstreamnt  +downstreamnt atgtccctcccttctatagattgtatatacgtcacggaggaacttgttcgcgaattgaag aatggaaaccctagcttcaaactctccgaacccgtccccatgcttcgcttcctctacgag ctttgctggaccttggttcgcggcgaattgccgtttcagaagtgcaaagcggcgttggaa tcggtggagttcgtggatggattgtcccgcgaagagttgggttcttgtttagctgatatt gttacgcaaatggctcaagatattgcaatgcctggggagtaccgttctcgtctcacaaaa ttggcaaaatggatggcagattctgcactggttcctttgaggcttttccaagagcgttgt gaggaagaatttctatgggaagctgaaatgatcaagataaaggctcaggacttgaagaac aaagaggtcagagtaaatactcgtcttctttatcagcaaacaaaatttaaccttcttcga gaagaaagtgagggctatgccaagctggttacccttctttgccgagattctgaagcttca actcaaaatgtatcagcagcaacaataggcattattaagtcattaattggacatttcgat ctagaccccaatcgtgcgtttgatatcgttttggagtgttttgaacttcagccagataat aagatctttctggaactgattccaatttttcccaagtctcatgcttcacagattcttggt tttaaatttcaatattatcagcgtatggaagtaaatagtcctgtaccatttgggctgtat aagcttgcagctttgctggtgaaggaagagtttattgatcttgatagcatatatgcacat ttacttcccaaggatgatgatgcatttgaccattataatgctttttgtgccaagcgactt gatgaggccaacaagatcgggaagataaatcttgccgctactgggaaagatttaatggat gatgagaaacaaggagatgtgacaatagatcttttttccgcgttagacatggaaactgag gcagttgttgaacgatttccagagcttgaaaataaccaaacgttaggcttgcttacagga ttcctttgcgtcgatgactggtaccatgcacatatactatttggacgtctctcacccctt aatccagtggaacacattcaaatttgtaacagcttgtttaggcttatcgaaaaatcaatc tcttcggcatatgacattgtccatcaagcacatttccaaagctttgggtcttcttcggga gccagcatcgatgctatggatgtggcaaattcatcagttcgtgggtcttttattgatctt cctagtgagctatttcagatgctttcttgtgctggaccttacctataccgtgatactcta ttgcttcagaaggtatgtagagtgttgagaggctactacttgtctgcactagagcatgta ggtaatggtgatggagcactgaatcctgaaattgttattggtgggaatcgagatccccgt ctgcacctgaaacaagctaggtcaaggatagaggaagccctaggaacatgtctacttcct tctttacaattgatccctgcaaatccagcagttggccaagagatctgggaagtaatgaat ctccttccatatgaggcgcggtaccgtttatatggtgaatgggaaaaagatgatgaacag attcctatggttttgtctgcaaggcaaacagccaagttggacactagaagaattttgaaa aggcttgcaaaggaaaatttaaagcaactgggccggatggttgcaaaactagctcatgcc aatccaatgacggtacttagaacaattgttcatcagattgaggcctacagggatatgatc actcctgtagtagatgcattcaagtatttgacacagctcgagtatgatgttttggaatac gttgtgattgagcgtttggcacaaggtgggcgtgataaactaaaggatgatggcctaaat ttgtcagactggcttcaatctttggcttcattttggggtcacctgtgtaagaagtatcca tccatggaattgaggggtcttttccagtatcttgtgaaccagttaaagaaagggcaagga attgagcttcttctcttgcaggagcttattcaacaaatggcaaatgtccagtatacagag aacctgactgaagaacagctggatgccatggcaggtagtgagactctccggtatcaggcg acttcttttggagtaactcgaaataacaaggcattgatcaagtccactaacaggctacgg gactcattgcttccaaaggacgaaccaaagctggctgttcctcttttgttacttattgct caacatcgttctttggttgtcataaatgcagatgccccttatataaagatggttagtgag cagtttgatagatgccatggtactcttcttcaatatgtggaattcctttgtagtgcattg acaccagcttcagcttatgctcaaatgattcccacacttgatgatcttgtccatctttac caccttgatcctgaggttgctttcttaatatatcgccctgtaatgaggctcttcaagtgt caggggagttctgatgtcttctggcctttggacgacagtgatgctacaaatatttctact acaaacttggattctgaacctacagaatactctggcaatgttgttctggatcttggctcc tcgaagaagataatttggtctgatcttcttgatactgttagaaccatgttgccttcaaaa gcctggaatagcctgtcccctgatctctatgctacgttttgggggcttactctctatgat ctttacgttcctagaaatcgatatgagtctgaaatttccaagcagcatgctgctcttaag gctctggaagagatttctgataattcaagttcagcaatcaccaaaaggaagaaagacaaa gaaagaattcaagaatctttagatcgcctgactagtgaactccgtaagcatgaagaaaat gttacatctgttcgtagacggctttctcatgaaaaagacaagtggtggagttcctgccct gatacttcgaagatcaacatggagttccttcaacgttgtatttttcctcgctgtactttc agtatgccagatgccgtctattgtgccatgtttgtacatactcttcattccctcggaaca ccattttttaacacagtgaaccacattgatgttctgatatgtaaaaccttacaacctatg atatgctgctgcactgaatacgaagcgggtagacttggaaggtttctgtgtgagacacta aagattgcatactattggaagagtgatgaatctatttatgaacgtgagtgtggaaacatg ccagggtttgctgtgtattatagatatccaaacagccaacgagttacatatggccagttt gttagggtacattggaaatggagtcaaaggataacgcggttattgattcagtgcttggaa tctactgagtacatggaaattcgaaatgctcttataatgttgacaaggatttctactgtc ttccctgttactcgaaagactggtattaaccttgagaagcgggtagctaagatcaaaagt gatgaaagagaggatctcaaggtgttggcaacaggtgttgctgcagctttggctgctaga aagccttcatgggtgacagacgaagaatttggcaatggctatcttgatagtaagcctgca ccatcactttcttcaaagtctgcatctggtaattcagtacctgcccaaagtagctctgcc attaaactttctcaaagtgaacctgctgggggaaaaacagttgccacagcaacccaacat tctgattctgtgaaagatcatatattaaaatcaaaaccagcagatgggaggttggaaaga acagaaagtgttacaattgtgaagcctgatcctggaattgtaaaactaaaagttggtttg ttggttaatggggcagatgcccagtcatccttgccctcggctactggacaatcaggatca ggaacatcaaggtcaactgagaatccaaaacaagtggatgaatccacaagaacattggat gaaaacatggctaaagttgctccaaagaactctacagaacctgagttgagaactacagca aaacgctcaaccattgctacatcacttactaagccacctaaacaagatcttgcaaaagat gatagtagatctggaaaagctgttggcaagacttctggcccttcaagtggcgacaaggat ctttcaactcatgcatcagagggtaggcaggttgggcctactaatgcttcctctgcagtc actgcaaatggtaacacagtttcagcttcagttaaaggttcaactccatctgctagagca ccatcagatagtcatggtaatgaattaaaggcagagagtggagcttccaagtcttctgat atgagggtttcttctgtaaaggaagatggagctgaagtttctgatgtacggcccccttct cgtcttgttcattctcctaggcatgataattctgcaaatgcttcaaaatctagtgataaa ctgcaaaagagagccagtcctgctgaagaacctgatagactaggtaaacgccggaaaggg gactctgaaacaagagatttagagggtgatgttcgattttctgatagagagaggtctgta gatcatggaattgaggaacataggccgacagataagcctttggatagatcaaaagataag agcaatgagagatatgacagggactacagggaaagagtggatcgtcctgataagtcccgt ggggatgatgtttttgctgaaaaatcaagagataggtcaattgaaagatatggaagagag cgttcagttgagagagttcaagagagaggtactgataggagttttgatagactctctgac aaagctaaggatgatagaaacaaagatgacagaagtaaattaaggtacaatgatacatca gtagaaaaatctcatgttgatgataggtttcatggtcaaaacttgcctccacctccaccc ttaccacctaatatggttccccaatctgtcaatactggtagaagagatgaagatgcggat agaagatttggagccactagacatactcaaaggctatctccaaggcatgaagagaaagaa cggaggcgatctgaagagaattctgtagttttgctggaggatgcaaaacgtagaagggat gacgatcttcgagagagaaagcgggaggagcgggaggtgctgtcaatgaaggcagaggag agggaaagagaaagagagagggagagggagagggagaaagcaaaccttttaaaagatgac atggatgcgggtgcagcttctaagaggcggaaactcaaaagggagcatctgccatcgggt gaagcaggtgagtattcacctgtggccccacctcctcctccccttggtgttagtgcacaa tcatatgaaggaagagacaggggagaacgaaagggagcaatgatccagcgcgcaggttac ttggatgaaccaaatctaaggattcatggtaaagaagttgctggcaaaatgacccgtcgc gaaacggatcaaatgtacgaccgcgagtgggatgatgataagaggagagttgaacaaaag cggagacatcgaaagtaa

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