Quercus lobata (valley oak): 115981742
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Entry
115981742 CDS
T07350
Name
(RefSeq) protein transport protein Sec24-like At4g32640 isoform X1
KO
K14007
protein transport protein SEC24
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115981742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115981742
Membrane trafficking [BR:
qlo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
115981742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
115981742
NCBI-ProteinID:
XP_030959940
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All DBs
Position
3:40778998..40804995
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AA seq
1015 aa
AA seq
DB search
MASYVPPGAPRPASNANNPPSSHPPPNFRANPNSLADNLHNLNFNSAAPRAPSPLPGTPF
SRQATQPRPPSGPPFPPTFSHPNEPSPWIVPPPGARPPPFVSSASRGLASNGQPVFASGA
LPGGQWFPPLGSAPQPPVRPPPTMAMARAPPQPPTATSRPLMGSSLIRAPPVQPASPFSA
APQARQPPTTAYPYGQPTWPLQPGQGAPPPPITGSPQPPRMFGMPPPLPNQSMTSVSSAV
GQIGAPVAGASKIDPNQIPRPIPSSSVILHETRQGNQANPPPPATSDYIVRDTGNCSPRY
MRCTINQIPCTDDLLTTSGMQLALMVQPLAIPHPSEETVQVVDFGESGPVRCSRCKGYIN
PFMKFIDQGRRFICNFCGFTDETPREYHCNLGPDGRRRDADERPELCRGTVEFVASREYM
VRDPMPAVYFFLIDVSTNAIQTGATAAACGAINQVIADLPEGPRTMVGIATFDSTIHFYN
LKRALQQPLMLVVPDVQDVYTPLQTDLVVQLSECRQHLELLLESIPTMFLENRTAESAFG
AATKAAFMAMKSTGGRLLVFQSVLPSIGIGALSARDAEGRTHLFAGEKEAHKLLQPADET
LKAMAIEFAEYQVCVDVFITTQTYVDIASIAVIPRTTGGQVYYYYPFSAVSDPAKLYNDL
RWNVTRPQGFEAVMRVRCSQGIEVLEYNGNFCKRMPTDVDLPGIDCDKTVMVTLKHDDNL
KDGSECAFQCALLYTTVNGQRRIRVTTLSLPCTSILSNLFRSAELDTQFACFLKQAASEI
PSRPLLLVKDRMTNLCINILLSYRKFCATVTSSGQLILPEALKLLPLYTLALIKSKGLRT
DGRIDERSFWINYLSSISTPLAIPFVHPRMVAIHDLNSKEGDQSLVPPVISLSTEHVNDG
GIYLLENGEDCLIYIGNSVDSDILQQLFCISSVDEIPAQFVLQQYDNPLSKKLNDLVNEI
RRQRCSYLRLKLCKKGDPSGMLFFSYMIEDKSSSGLSYVEFLVHVHRQIQLKMSS
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttatgtgcctcctggggcacctagacctgccagcaatgccaataatcctcca
tcatcacacccaccccctaattttcgggctaatcccaattcattagctgataatttgcac
aatttgaatttcaattctgctgcccctagagctccctcccctttgcccgggacgccattt
tctagacaggccacccagccacgacctccatcaggacccccatttccacctacttttagt
caccccaacgaaccgagcccttggattgttccaccaccgggtgctcgcccacctcctttt
gtttcgagtgcatcacgtggtttggcgagtaacgggcagccggtgtttgcctcaggggca
ttgcctggtggacagtggtttcctccacttggcagtgcaccacaaccccctgtcaggcct
ccaccaacaatggcaatggctcgagctcctcctcagcctccaaccgcaacttctcgtccc
cttatgggaagttcattgatcagagctcctccagtgcaaccagcatcaccattttcagca
gcaccacaagccagacagccacctactactgcttatccttatggccagcccacatggccc
ttgcaacctgggcagggggctccacctccaccaattactggttctccacaaccacctaga
atgtttggaatgcccccaccactaccaaatcagtctatgacttctgtatcatctgctgtg
ggtcaaattggagcacctgtggcaggggcttcaaagattgatcccaaccaaattcctcgg
cccattccaagttcctcagtgatcttgcatgaaactcgtcaaggcaatcaggccaatcct
cctccgcctgctacaagtgattacattgttagagacactgggaattgcagtccacgttac
atgaggtgtaccatcaatcagattccatgcactgatgatcttttgacaacatcagggatg
cagttggctctgatggtccaaccattggccattcctcatccatctgaggagactgtccaa
gttgtggattttggggaaagtggtcctgttcgatgttctcgttgcaaaggctatataaat
cctttcatgaagttcattgatcagggaaggcggttcatctgcaatttttgtggatttact
gatgaaactccccgtgagtaccactgcaatctaggtccagatggtaggcgtagagatgct
gatgaaaggcctgaactgtgtagaggaacagttgagtttgttgcttcaagggaatacatg
gtgcgtgatccaatgccagctgtgtattttttcctcattgatgtatccacgaatgccatt
caaactggtgcaactgctgctgcttgtggtgcaatcaatcaagttattgctgaccttcct
gaaggtcctcgaacaatggtgggaattgcaacatttgactcaacaatccatttttacaat
ttgaagcgtgcattacagcagccactgatgctcgttgttcctgatgtacaagatgtttat
actcctttgcaaactgaccttgttgttcagctttccgagtgccgtcaacatttagagcta
cttctggagagcattccaaccatgtttctggaaaatagaactgctgaatcagcctttggt
gctgccaccaaggctgctttcatggcaatgaagagtactggaggaaggcttttggtattt
cagtcagtcttgccatcaattggcattggtgccctttctgcaagagacgctgaaggaaga
actcacctctttgcaggggagaaggaggcccataaattacttcaacctgctgacgaaaca
ttaaaggcaatggcaattgaatttgctgagtatcaggtctgtgttgatgtatttatcact
acccagacttatgtagacattgcttctattgctgtcatcccaagaaccactggagggcag
gtatattattattaccccttctcagctgtttctgatcctgcaaaactttacaatgatctt
agatggaacgtgacaaggcctcaaggttttgaggcagtgatgcgcgtgagatgcagccag
ggtattgaagttctagaatacaatggaaacttctgcaaacgcatgccaactgatgttgac
cttcctgggattgactgcgacaaaaccgttatggttaccttaaaacatgatgataatttg
aaggatggctcagaatgtgcttttcagtgtgcccttctttacaccaccgtcaatggacaa
agacgaattcgagttactacattatctctgccatgcacaagtatactaagtaatcttttc
cgctcggctgagttggatactcaatttgcatgtttcttgaagcaagcggcaagtgaaatc
ccttccaggccacttttgcttgtcaaggatcgaatgacaaacctttgcatcaacattctg
ctttcttatcgtaaattttgtgctacagtgacatcttctggacaacttattcttcctgag
gcacttaagcttctgcctctgtacacccttgcattaattaagagtaagggattacgaact
gatgggagaatagatgaacgatcattctggatcaactatttgtcatccatttctactcca
ctggcaattccatttgtgcaccccaggatggtggctatccatgaccttaattcaaaggag
ggtgatcaatctcttgttcctcctgtgatttcgctttctactgaacacgtgaatgatggg
ggaatttatcttcttgagaatggtgaggattgtttaatatatattgggaactcagtggat
tcagatatcttgcaacagctattttgcatttcctcagttgatgaaattccagctcagttt
gtgctgcagcaatatgacaatccattatcaaagaagctaaatgatttggtaaacgagata
cggcgccaaagatgttcctacctccgcttgaaattgtgcaagaaaggagatccatcaggt
atgctgttcttttcatatatgatagaagacaagagctcaagtggcctctcctatgttgag
tttctagtacacgtccaccggcaaattcaacttaaaatgtcatcatga
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