Quercus lobata (valley oak): 115981753
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Entry
115981753 CDS
T07350
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qlo03000
]
115981753
Transcription factors [BR:
qlo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115981753
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
115981753
NCBI-ProteinID:
XP_030959959
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All DBs
Position
3:complement(41153344..41158417)
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AA seq
579 aa
AA seq
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MASSSSSTLFFGTREENQSQTAQQPSSTITSSTTPTTAPQKKRRNQPGNPNPDAEVIALS
PKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRKVYLCPEPTCVH
HDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTL
FSRRDSFITHRAFCDALAQESARHPTNLNTMGSHLFGSNHMSLGLSQLGSQIPPLQNQNP
PSNNMLRLGSAGGAKFEHLISPSNPSSFGQPPQSMHSSSLFIQDANQGFPNKPQLHGLMQ
LPDLQSNSNNSSPAASLFNLSFFPNNNSSPGGISSGDNVNISSTNLSSSGLLMQDQLNNS
NGGSQGTTLFSTNMGDHVGSGVSSLYSNSLPPENITSHMSATALLQKAAQMGSTTSSNNS
SSMFRGLASSKSEKQNVLANFGVSFGNDNGGESLRSHIESGNHLQGLMNSLANASSSMFG
RGQDNNFGGFNGSGVTLDQHHSNTNFSTVDEAKLHQNLAVNFGGSDKLTLDFLGVGGMVR
NMGGGYSQREQHAINMSSLEPELKTAQQASQAFGSTTMQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtcttcctcatccacactgttttttggaaccagagaagagaatcaaagccag
acagcacaacaaccttcttctacaatcacttcctcaactactccaaccacagctcctcaa
aagaaaaggagaaaccaacctggaaatccaaatccagatgcggaggtaatagcactgtct
cccaagaccttaatggcaacaaataggttcatatgtgaggtatgtaacaaagggttccaa
agggagcaaaacttacagcttcacagaagagggcacaacctgccatggaagctaaagcaa
aagactaacaaagaaccgaaacggaaggtgtatctgtgccccgagccgacatgcgttcac
catgacccttcacgagctctcggcgacctcaccggcattaaaaagcactactctcgaaag
cacggggagaagaagtggaagtgtgagaagtgttcaaagaggtatgccgtgcagtcggac
tggaaggctcattccaagacctgtggcactagagaatacagatgtgactgtggcactctt
ttctctaggcgagacagttttatcactcacagggccttttgtgatgcactggctcaggag
agtgctaggcatcctaccaacttaaacacaatggggagtcatctttttggaagcaaccac
atgagcctaggcctatcacagcttggttctcagattcccccactgcaaaatcagaaccct
ccatctaataatatgttacgactaggcagtgccggtggggcaaagtttgagcacctaatt
tctccatcaaatccttcttcatttggccagcctccacaatcaatgcattcatcttcctta
ttcattcaagacgcaaaccaaggttttccaaacaagccacagttgcatggactcatgcaa
cttcctgatcttcaaagcaatagtaacaattcgtcaccagctgctagtctctttaacctt
agcttctttcctaataataacagttccccgggtggtataagcagtggagacaatgtcaat
atctctagcaccaatttatcatcttcgggcttattaatgcaagaccagctcaacaatagc
aatggtggcagccaagggacaacgctattctctactaacatgggtgatcatgttggctct
ggtgtctcttctctctacagcaattctttgcctcctgaaaacataacttctcatatgtct
gccactgcattgcttcaaaaagccgctcaaatgggatcaactacaagcagcaacaatagt
tcttctatgtttagaggcttggctagttctaaatccgagaagcaaaatgtgttggccaac
tttggtgttagttttggcaatgataatggaggagagagcctaagatcacatatagaaagt
ggaaaccatcttcaagggttaatgaattctcttgctaatgcaagctcttccatgtttgga
cgtggacaagacaacaactttggtgggttcaatggcagtggggtcacgttggaccagcac
catagtaacacgaatttcagcactgtggatgaggccaagttacatcaaaatctggctgtg
aactttggagggtctgacaagttgacattggattttttgggcgtgggaggaatggtaagg
aatatgggtggagggtattcacaaagagaacaacatgctatcaatatgagttctttggaa
cccgaattaaagacagcccagcaggcaagtcaagcatttggaagcacaacaatgcaatga
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