Quercus lobata (valley oak): 115981756
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Entry
115981756 CDS
T07350
Name
(RefSeq) protein CHROMATIN REMODELING 19
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qlo03036
]
115981756
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115981756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
SWI2_SNF2
Myc_N
Motif
Other DBs
NCBI-GeneID:
115981756
NCBI-ProteinID:
XP_030959962
LinkDB
All DBs
Position
3:complement(41198599..41216695)
Genome browser
AA seq
747 aa
AA seq
DB search
MKRVFEEISDDEWENHSHSFKPSRVLNTTTNPTPPAIESFAYGSSKQNPKEDIVFDLEDD
DEDVVEAARPSVANRGRRFVVEDEESDGDGDDGDKDADIAQVYNVKSSDEEGNVEAEAEE
EEEEEEEEEEEEEEDVVAKALQKCARISAELKRNLYGSSVTACDRYAEVESSSVRIVTQD
DVDAACKSQDSDFQPVLKPYQLVGVNFLLLLYQKDIGGAILADEMGLGKTIQAITYLTLL
KHLNNDPGPHLIVCPASVLENWERELKKWCPSFSILQYHGAARSAHSKQLNSLAKAGKPP
PFNVLLVCYSLFERHSAQQKDDRKILKRWQWSCVLMDEAHALKDKSSYRWKNLMSVAKNA
NQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNADDMDLVGRMKSILGPFI
LRRLKSDVMQQLVPKIQRVEYVVMEKQQDDAYKEAIEEYRAASRARIAKNSEINSNNIFG
VLPRRQISNYFVQFRKIANHPLLVRRIYRDEDVVRFAKKLHPMGVFGFDCTLDRVIEELK
SYNDFSVHRLLLYYGVTDTKGILPDKYVMLSAKCRALGELLPSLKQGGHRVLIFSQWTSM
LDILEWGLDVIGVTYKRLDGSTQVTERQTIVDTFNNDTSIFACLLSTRAGGQGLNLTGAD
TVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIYRLVTKGTVDENVYEIAKRKLVLDAAVL
ESGIEVDNEGETSEKTMGEILSALLLG
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagtgttcgaggaaatctccgacgacgagtgggagaaccacagccactccttc
aagccctctcgcgtcctcaacaccaccacgaaccccacccctccggcgatcgaatccttc
gcttacggctcgtccaagcaaaacccgaaggaggacatagtgtttgatttggaggacgac
gatgaggatgtggtcgaggccgccagaccttccgtggcgaaccgtggccgtcggttcgtg
gtggaggatgaggagagcgacggcgacggcgacgacggcgataaggacgcggatatcgcg
caagtgtacaacgtgaagtcaagcgatgaagaaggaaatgttgaagcggaagcggaggag
gaagaggaggaggaggaggaggaggaggaggaggaggaggaggatgtggtggcaaaggct
ttgcagaagtgtgcgaggatatcggccgagttgaagagaaacctgtacggctcctccgtc
accgcctgcgaccgctacgccgaagtcgagtcctcttcagtcaggattgtcactcaggat
gatgttgatgcggcatgtaagtcacaggattcggattttcaaccggttctcaagccatat
caactggttggtgtcaattttcttcttctgttgtatcagaaggatattgggggagccata
ttggcggatgagatgggccttgggaagactatccaggctattacatatctgactttgctg
aaacacttgaacaatgatcctggtccacatttaatcgtatgtcctgcttctgttttggaa
aactgggaaagagaacttaagaagtggtgtccatcgttttctattctccagtatcatggg
gctgcgcgatcagcacattcaaagcagttgaactctttggccaaagctggaaagccgcct
ccttttaatgttcttcttgtgtgttattcactttttgaaagacacagtgcacagcagaaa
gatgatcgtaaaattctgaaacgttggcaatggagctgtgtgctgatggatgaggcccat
gccttgaaggataaaagcagttataggtggaaaaatctaatgtctgtagcaaagaatgca
aaccagcgtcttatgctgacaggaacaccacttcaaaatgatctacatgaactgtggtca
ttattggaatttatgatgcctgatctttttgctactgaggatgtcgacttgaaaaagctt
ttaaacgcagatgatatggatttggttggtcgtatgaagtctattttgggaccgtttatt
ttgagacgtttgaaatctgatgtgatgcagcaacttgttccaaagattcaacgggttgag
tatgttgtaatggaaaagcagcaggacgatgcttataaggaagctattgaggagtatcgt
gcagcttcacgagctcgtattgcaaaaaattcagagataaactcaaataatatttttgga
gttcttcctcggcgtcaaatctccaactattttgttcagtttcgtaagattgcaaatcat
cctttattggttaggcgtatttatagagatgaagatgttgttcgttttgctaaaaagtta
catccaatgggtgtgtttggttttgattgtaccttggacagggtaattgaggaacttaag
agttataatgacttctccgttcaccggctcttactttattatggtgtcactgatacaaag
ggaatccttcctgacaaatatgttatgctttcagcaaaatgtcgggcgttaggtgaactt
ctcccttcactaaagcaaggtggtcatcgagttcttatttttagccagtggacatcaatg
cttgatattttggagtggggtttggatgtgattggggttacgtataaacgacttgatgga
agtactcaggtgacagagcgacaaacaatagttgatacgtttaataatgatacttctata
tttgcatgcttgctgtccacaagagctggagggcagggtttgaacctgactggagccgat
actgtcatcattcatgacatggatttcaatccacagattgatcggcaagctgaagatcgt
tgtcatcgcattggccaaacaaagcctgttaccatatacaggctggttaccaagggtact
gttgatgagaatgtttatgagattgcaaaacggaagctagtactggatgcagctgtcctt
gagtctggtatagaggtggataatgaaggtgaaacatctgagaagactatgggggagata
ttatcggctcttttgttgggttag
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