Quercus lobata (valley oak): 115981852
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Entry
115981852 CDS
T07350
Name
(RefSeq) AP-5 complex subunit beta-1 isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115981852
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
115981852
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GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Uso1_p115_head
Motif
Other DBs
NCBI-GeneID:
115981852
NCBI-ProteinID:
XP_030960114
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Position
3:43432193..43439714
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AA seq
1118 aa
AA seq
DB search
MSQKPLYPQDWESLIEDFQHGGSRRRKWSSTPSLLDLALYSILKRDFPLKIQLIIFLEEF
SDNFPDFDQHFLERLIDTLKIIVQSPTDNLHITLSLKDQMLVSTTSIFISTIHQFNIVII
ESLVEFLLILINRPNHGPDRQTRGVACECLRELERSHPCLLSEIAGHLWSLCQNERTHVT
QSYMLLFTWVIHNIVVHNVNVSILNTSVPLVPFNVPQSLLLSSDGCSSNSNSNGTSNYNY
KELRRAMAFLLESPQVLTACGMVEFMAMIIPIAVALELQASMLKVQFFGMVYSYDPMLCH
VVLKLYLSFFDAFDGQEGEIARRLMLISKEAQSFLVFRLLALHWFLGLNQLVLSSKGDKK
KKPIMAFDLMGLSFYPNVFDPLALKALKLDLLALCMESLKSKSDSEMGDSVEKIFADGIV
SVSAYKWLPPRSTETKVAFRAFHKFLIGGSSHFDTDPSTTTAIMESTIFHSLQGMLLDMM
LECQKLVPVIVAFVDRLLGCRKHCWLGERLLQTFDENLLPKVVMDYKLASFFPLFDRIAE
NDTIPPSRLLELLIKFMVFLVEKHGPDTGLKSWSKGSKVLGVCRTMLMHHHSSRLFLRLS
RLLAFTCLYFPDLEVRDNASMRFCRIYLRMLICVPGKKLRDMLNLGDQLLGISPSPLSNS
IFNIQSPRTSHNIKKSRNISSYVHLDRVVPLLVKQSWSLSLSTLGVDSNKPGYLEGIRDS
ESPVEEREIDGSAEIHIPETERINKPQEPLRVMDSKISEILGTLRRYFSSIPDYRHMPGI
KVRISCTLRFESEPFNREWGVDSPASGLDRVDALPAIYATVLNFSSSAPYGSLPSYHIPF
LLGEPPRNDYDSHQQVPLDIVLVENGNGEEESFRAPVMIELEPREPTPGLIDVSIVTNAE
NGHIIRARLHSIPIGIEDMFLMATVPSDIPKEVIPGYYSDLFSTLWEACGSSSNTGRETF
PLKGGKGVAAISGTQSVKLLEVPATSLIRATERYLAPFVVSVIGEPLVNLVKDGGIIRDI
IWKDVASDSSLVDTTSVASFDRGPLHLTYFDDEDERDSVVSTSKRKMGCFLILIFLPPRF
HLLFQMEVCDVSTLVRIRTDHWPCLAYIDDYLEALFLA
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaagcctctctacccacaggactgggagtccctcatcgaagatttccaacac
ggcggttcacgccgccgcaaatggagctcgaccccctcactcctcgacctcgctctctac
tcaatcctcaaaagggatttccctctcaaaatccaactcattatcttcctcgaagaattc
tcagacaatttcccagatttcgatcaacacttcttagaacgactcatcgacaccctcaaa
atcatagtccaatccccaactgataatcttcacattactctgtctctcaaagaccaaatg
ttagtttccaccacttccattttcatctccaccatccaccaatttaacatcgtcatcatc
gagagcttggtcgagttcctgttgattctcatcaaccgtcccaaccatggacccgaccgc
cagacacgtggcgtggcttgtgagtgcttgagagaactcgagcgatctcacccttgttta
ctctccgaaatcgctggtcatctctggagtttgtgtcaaaacgagcgaacccatgtaact
caaagctacatgcttttgttcacttgggtcattcataatattgttgttcacaatgtgaat
gtttccattcttaacacctctgttcctttggttcctttcaatgttccgcaatcgttgttg
ttgtcatccgatggttgttcttcgaattcgaattcgaatgggactagtaactataattac
aaggagctgaggcgggccatggcgttcttgcttgaatcgccgcaggttttgacggcttgc
ggaatggtggagttcatggctatgataattcccattgcggtcgcgttagagttacaggcg
tcgatgctgaaggtacagttctttgggatggtttattcctatgatccaatgttgtgtcat
gttgttttgaagttgtatttgagtttctttgatgcgtttgatgggcaagaaggcgagatt
gctcgtcgtcttatgttgatatctaaagaagcacagagttttttggtgtttcggttgctt
gctcttcattggtttttgggtcttaaccaattggttttgagtagcaaaggtgataagaaa
aagaagccaataatggcttttgatttgatgggtttgagcttttatcccaatgtgtttgat
ccgcttgctctcaaggccttgaagcttgacctgctcgcgctatgtatggagagcttgaaa
tccaagagtgattcagagatgggcgactctgtggagaagatttttgcagatggtattgtg
tctgtatcggcttacaagtggttacctccacggagcactgaaaccaaagtggccttccgt
gccttccataagttcttgataggtggttcgtctcattttgacactgatccttctaccact
acagctatcatggagtccaccatcttccattctttacaggggatgctattggacatgatg
ttagagtgtcaaaagttggttccggtgattgttgcttttgttgaccgcttgttgggctgt
cgaaagcactgttggttgggagagcgcctgcttcagacatttgatgagaatttgcttcca
aaagttgtaatggattataaattggcatctttctttcctttatttgatagaatcgctgaa
aatgatacaatacctccaagcagattgttagagctgctgatcaaattcatggttttcctt
gttgagaaacatggcccagatacaggactaaaatcatggtctaagggaagtaaggttctt
ggtgtctgtcgaaccatgctgatgcaccaccatagctctagattgttccttagactatct
cgcctcctcgcatttacttgcctttattttcctgatttggaggtacgtgacaatgcaagc
atgagattttgcaggatctatctgcggatgctgatctgtgtaccaggaaagaagcttaga
gacatgctaaaccttggggatcagctccttggcatttcaccatctccactttccaactca
atttttaacatccagtctcctcgaacctctcacaatatcaagaaatctaggaacatctca
tcctatgttcaccttgatcgagtggtacccttgcttgtcaaacaatcttggtcattgtct
ttatcaactttgggtgttgacagtaacaaacctggttacctagagggcatcagagacagt
gaatccccagttgaggaaagagagattgatggaagtgctgaaatccacatcccagagact
gaaagaattaataagccacaggagccattgcgagtgatggattcgaagatttcagagatc
ttaggaacattaagaaggtatttctcaagcatacctgattatagacatatgccagggatt
aaggttagaatatcctgtactttgagattcgaatctgagccttttaatcgtgaatgggga
gtagactcccctgctagtggattggatagagtagatgcccttcctgctatatatgcaact
gtgcttaatttttcatcctctgcaccatatggatctcttccatcatatcacatacctttt
ctccttggtgaacctcccagaaatgactatgattctcatcaacaagtgcctttagatatt
gttttagtagaaaatggtaatggtgaagaggaaagttttagagctcctgtaatgattgaa
ttagaaccacgggaaccaacacccggtctgattgatgtttctattgtaacaaatgcggaa
aatggtcacattattcgtgctcggcttcatagtattccaataggcatagaagacatgttt
ctcatggctactgtcccatctgacatcccgaaagaggttatacctggttattactcagac
ttgttcagtactctttgggaggcatgtggtagttcatccaacactgggcgggagaccttt
ccactgaaaggaggcaaaggagttgcagctattagtgggacccaatcagtcaagctactt
gaagtccctgcaacctctttgattcgggctacagagcgctacttggctccctttgttgta
agcgtgattggtgaaccacttgtcaaccttgtgaaggatgggggaatcattagagatatc
atctggaaggatgtggcttcagattcttcccttgttgataccacctcagtagctagtttt
gatagaggcccacttcatcttacatactttgatgatgaagatgagagggacagtgttgtc
agtaccagcaaaagaaagatgggttgctttcttattttgatatttcttccaccaaggttc
catcttcttttccaaatggaagtatgtgatgtttcaactttagttcgaattcgaactgat
cattggccctgcttagcttatattgatgattatttggaagctttatttttggcgtag
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