Quercus lobata (valley oak): 115982006
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Entry
115982006 CDS
T07350
Name
(RefSeq) U-box domain-containing protein 44-like
Organism
qlo
Quercus lobata (valley oak)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
Arm
zf-RING_2
HEAT_2
zf-C3HC4_3
MCAfunc
zf-rbx1
Arm_2
Nipped-B_C
zf-RING_5
Zn-ribbon_8
Motif
Other DBs
NCBI-GeneID:
115982006
NCBI-ProteinID:
XP_030960335
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All DBs
Position
3:complement(48527685..48532645)
Genome browser
AA seq
1026 aa
AA seq
DB search
MDFNGEIQIALLQALWDNVTQQAIELVSETRDAMLNKNSFQEFSNNIFKLKSLLGSLNAK
KVVEARGLESTRAALENLNFQLNKACKIIQDCKSGSRIRLLFKSNSILLQMQDMAKDIAK
TISSFQLINLDITLDLKTMTNQIIDNLSSMEFQSALATEAIASEIENSISQSNKNQENAL
KLLEKIAEAVGASVNASMVQTELELLKQEKEEMEAQKKQAEALQLSQLIQFLYSTEIVTR
PHDDKRIATYHQQYPIDSFMCPLCHEMMADPVAIPCGHSFERKAIREYFERGERKCPTCR
QELLSLDLTPNLSLRNSIEEWKQRDMDLRFQAAVPGIKSDDSSRQNKALEDMQLLMEKPS
YATKVAEERLIPKLVEILKDDRLNSAAALKCLYYIAKYCDNHKEAIVEAGAVRRIVKQIY
KDGTEPDAIAILLELSERETLAEKIGSTKDCIPLLVSLLSNNNPDVSQNAHNVLQNLSSN
THFVVKMAEAGHFQPFVARFNQGPQETRTLMAAALIQMQLKEINIQVLKDKQFTHNLVQM
LSSSTPACKATCLRSIKKLVEYPKMVKRLLKDPVTIPHLLGLISFVRSDPREKEEAAEIL
ALLVGASQHFELQKYQGLQELQSKHNVNLLLQLVASSDPQTKVQFLHLLVELSQKSETAR
NLIRQDENAVGQLFSLLHSDQPVVKRWTMKLIYCISEGDPAGVSLPPSPAKELAITTLAS
ILTSSLDIEERSTAAGIISQLPKDDITIDEILCKSDTLKAIHEVICSADEEYNGNRAPAD
QGTSLLENALAALMRYAEPSKPELQRQVGKLELYPSLVRVLSRGSSLAKQRTAIALAKLS
QSTSQSVSDTTIMTERSKHSMPMLFLTKLLPNMSWCCSTSSTNGISCSVHGAACSHRDTF
CLVKADAVKPLVRTLSETESGVAEASLMALETLLTDHSTLSHATAAIVDNQGVVAILQVL
EKGSIPAKTKALDLFQKILNHTQITQTLFQRFEGILIQLLHDDDLKKKAALVLKQMKILP
EQSSYF
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggacttcaatggagaaatccagatagcattactacaagcactatgggataatgtaaca
caacaggcaatcgagcttgttagtgaaacaagggatgcgatgctgaacaagaacagcttt
caggaattctccaataatatttttaagcttaaaagcctccttggctcattgaatgccaag
aaagttgttgaagcaagaggtttagaatcaacaagagctgcattggagaacttgaatttc
cagctgaataaagcctgcaagatcattcaagattgcaaatctggtagtcgcatccgtctc
ttatttaagtcaaactcaatactcttgcagatgcaggatatggccaaagatattgccaag
actatttcctcgtttcagctaatcaatcttgatataaccttggacttaaagactatgact
aaccagatcattgacaacttgagctcaatggagtttcagtcagcattagcaacagaagca
attgcttctgagatagaaaattcaatatcccagagcaataagaatcaggagaatgcttta
aagctcctggagaaaattgcagaagctgttggtgctagtgtgaatgcatccatggtgcag
actgaattggaacttctgaagcaggaaaaagaagaaatggaagctcaaaagaagcaggca
gaggcattacaattatcgcagttgattcagttcttgtacagtacagaaattgttacgagg
ccacacgatgataaaagaattgccacataccaccagcaatacccaattgattcattcatg
tgtccattatgccatgagatgatggcagacccagttgcaatcccctgtggccacagcttt
gagaggaaagccattcgggaatactttgaaaggggagagagaaagtgccctacctgcaga
caggagcttctatccctggatcttacgccaaacctttcccttcgaaactctatcgaagaa
tggaagcagcgagatatggacttaagattccaagctgcagtgcctggaatcaaatcagat
gactcatctagacagaacaaggccttagaggacatgcaacttttgatggagaagccttca
tatgcaaccaaagttgcagaggaacgactcataccaaagttggtggagatactaaaagac
gataggttaaatagtgctgcagcactaaaatgcctttactacatagctaaatactgtgat
aatcacaaagaagccatcgttgaagcaggggctgtccgtcgcatcgtgaagcagatttat
aaagatggaacagaaccagatgccattgcaatcttgttggagctatcagaaagagaaacc
cttgcagagaaaataggaagtacaaaagactgcattcctcttttggtttctttactctca
aacaacaaccctgatgtatcacagaatgcccacaatgtgttgcaaaatctctcctctaat
acacattttgtcgttaagatggctgaagccggacacttccaaccatttgttgctcgcttt
aaccaaggacctcaagagaccagaacattgatggctgcagcattgatacagatgcaactc
aaggaaatcaacattcaggtcttaaaggacaagcaattcacacataatttagtccagatg
ctctcttcaagtaccccagcatgcaaagcaacttgcctcagatctatcaaaaagcttgta
gagtaccccaagatggtaaagcgacttctaaaagatcctgttacaatacctcatttgctc
ggtctcatctcatttgtcaggtctgacccacgagagaaagaagaagctgcagaaattctt
gctctactggttggagctagtcagcactttgaacttcagaaatatcagggcttgcaggag
ctccaatcgaagcataatgtcaatctccttctgcagcttgtagccagctctgatcctcaa
actaaggttcagttcttacacctgctggttgaactcagccagaaatctgagacagctcga
aacctaattcgacaagatgaaaatgcggtggggcaactcttctctttgcttcacagtgac
caacctgtggtgaagcggtggacaatgaagctgatatactgcatttctgaaggtgatcct
gcaggggtttcgctaccaccatctcctgcaaaagagttagcaattaccaccctggcaagc
atcctcacgtcttcactagatattgaagaaaggtccactgctgctggaatcattagccag
cttcccaaagatgatattactattgatgagatactctgcaaatcggacacattaaaagcc
attcatgaggtgatttgcagcgccgatgaggaatataatggaaacagggcacctgctgac
cagggtacatctttactagaaaatgctctagcagcactgatgagatacgcagaacctagc
aaacctgaacttcagaggcaagtgggcaaacttgaactgtacccttcactagttcgtgtt
ctctccaggggcagctcgctagccaagcagcgaacagctattgcacttgccaaactatcc
caatccaccagccagtcagtctctgatacaaccatcatgacagagagaagcaagcattcc
atgccaatgctctttttgactaagcttctaccgaacatgtcttggtgctgctcaacctca
tcaacaaatggaatctcatgttctgttcatggtgcagcttgttcacatagagatacattc
tgcctcgtcaaggctgatgcagtgaagccactggtgcgaactttgagtgagacagaatcc
ggtgtggcagaggcttctttgatggcgctcgaaacattgttaacagaccatagcacactg
tctcatgcaactgcagccattgtggacaaccagggagtggtggccattctacaagtcctc
gagaaggggtccatacctgccaaaaccaaagccttagacctcttccagaagatcctaaac
catacacagatcacccaaacattatttcagcggtttgagggcatcctcatacagctactt
catgacgatgatctcaaaaaaaaagcagctttggtgcttaagcaaatgaaaattcttcca
gagcaatcttcttacttctga
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