Quercus lobata (valley oak): 115982086
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Entry
115982086 CDS
T07350
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115982086
Enzymes [BR:
qlo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115982086
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115982086
NCBI-ProteinID:
XP_030960454
UniProt:
A0A7N2L9N2
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Position
3:complement(65543473..65545902)
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AA seq
444 aa
AA seq
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MHTVAMAEVNKNCFLLFFFVSFVVIIPTLHANIAEYDDYWKKRAAQAEKDNHEAYNPDPE
EVTNSFNSHVNKALDGANSTRRQLKKYKGPCVATNPIDRCWRCDPEWYNHRKRLTKCVLG
FGHKTIGGKKGKYYVVTDSSDGDMVNPKPGTLRHAVIQKKPLWIVFARSMVIRLNQELIM
TGHKTIDGRGANVRIAYGAGITLQFVKNVIIHNIHIHNIVAGSGGTIRDSIDHVGFRTPS
DGDGISIFGSSKIWIDHVSMSNCQDGLIDAIMGSTAITISNCHFTHHNEVMLFGASDSFS
GDKIMQITVAFNHFGRGLVQRMPRCRWGFVHVVNNDYTHWLMYAIGGSSSPTIISQGNRF
IAPPNLAAKEVTKRDYAEQGVWQNWIWRSQGDLMMNGAFFVQSGAPLKTHGFSKKQLIKS
KPGTYVTRLTRFSGTVRCRKGIPC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcatacagtagcaatggcagaagttaacaaaaattgctttcttctcttcttttttgta
tcatttgttgtaatcatcccaacccttcatgccaacattgctgaatacgatgattactgg
aagaaaagagctgcccaagccgaaaaagacaaccatgaagcctataatcctgatcctgag
gaagtcacaaatagcttcaactctcatgtcaacaaggctttggatggcgctaacagcaca
agaagacaattgaaaaagtataaaggcccatgcgtggccaccaatcctattgatcgatgc
tggaggtgcgaccccgaatggtacaatcaccgcaagaggctaactaaatgtgtccttggc
tttggccacaagactattggtggaaaaaagggaaagtactatgtggtcacagattcctca
gacggtgacatggtcaatcccaaacctgggactctcagacatgctgtgattcaaaagaag
cccctctggattgtgtttgcacgcagcatggtcattaggcttaatcaggagctaataatg
actggacacaaaaccattgatggtaggggagctaatgttcgtattgcttatggtgctggc
atcactctccaatttgtcaagaatgtgatcatccataacatccatatccataacattgtt
gctggaagtggtggaactattagggatagtattgaccacgttggttttaggacccctagt
gatggtgatggtatctctatctttggctcatccaaaatctggatcgaccatgtttccatg
tctaattgccaagatggtctcattgatgccatcatgggttcaactgctattaccatctcc
aattgccatttcacccaccacaatgaggtgatgttgtttggagcaagcgatagcttctct
ggcgacaagataatgcaaattacagttgccttcaaccatttcggccggggattggtgcag
cggatgccaaggtgccgatggggattcgtccatgtggttaacaatgattacactcactgg
ctcatgtatgccattggtggtagcagcagtcctactattatcagtcagggtaatcgattc
atcgctcctccaaacctggctgctaaagaggtgaccaagagggactatgcagaacagggt
gtctggcagaattggatatggagatcacagggtgatctgatgatgaatggtgcattcttc
gttcaatctggggctccacttaaaactcatggtttctcaaagaagcaattgatcaagagt
aaacctggcacatacgtgacaagactcactcgcttctcgggcacagtaagatgcagaaag
ggcataccttgttaa
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