Quercus lobata (valley oak): 115982105
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Entry
115982105 CDS
T07350
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115982105
Spliceosome [BR:
qlo03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
115982105
Other components
Complex C specific factors
115982105
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
G-patch
G-patch_2
TIP_N
Motif
Other DBs
NCBI-GeneID:
115982105
NCBI-ProteinID:
XP_030960480
UniProt:
A0A7N2LBD9
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Position
3:62747683..62749997
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AA seq
670 aa
AA seq
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MELIEKFAQWIDDDDNDYSFGVSKRCRLDGDIYKKTKPMNFISTGTQRIDNNGGSAGLGF
TEEEEDFLPTAFGKMIKEGALKRMREKEKSKGKRARDDEGGFGFASVGGEFEKHTKGIGM
KLLQKMGYKGGGLGKNAQGIVTPIQPKLRPRNMGIGFNDFNETEDKKKGLLGSERVGVER
VKEKRLWSTKKKLENEEDLKEEKDRLLVVSERQKRQLYSMVEILNVLDQLDEDRSTGELT
LDSLAELFIQLKSRFAEDYKLCNLSVIACSYALPLFIRVFQGWDPLQNPFHGFEIVSLWK
SLLLSDQEFTASPYSQLISQVLLPAVRLSVINTWQAREPEPMLRFLDSWQKLLPHSVLHY
ILDYIVMPKLNSAVGCWEPLRETVPIHLWVHPWLRYLGHKLEGIFETIRFKLSQLLVAWH
PSDASAYTILSPWNSVFDSASWEHLMSRFIVPKLQLILQEFQLNPANQKLDEFHWVMKWA
SDIPSHLMVDMMVRFFFSKWQQVLYHWLQASPDFEEITNWYLEWKELLPKELLANESIRY
QLNRGLEMMNQAVEGLEVVQPCLEENIGYFRVPEQRQFEAQQKAVTQQSAMSFSMDDMSV
KEVIEAHAQQHGLLFKPKPGRRHDGHQIYAFGNLSVIIDALNQKVYAQIEEGWSLVSLQD
LVDKHQSSLS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggagttgatagagaagttcgcccaatggatcgacgacgacgacaacgattactcattt
ggagtatccaaaaggtgtcgcttagatggagatatttacaagaaaaccaaaccgatgaac
ttcatctccaccggcacccagagaatcgataacaatggcggctctgctggtcttgggttt
actgaggaggaggaggattttttgccaacggcgtttgggaagatgattaaggagggagcc
ttgaagaggatgagagagaaggaaaagtctaagggtaagagagctagagacgacgaaggt
ggttttggttttgcaagtgttggtggtgagtttgagaagcacaccaaagggattggtatg
aaactgttgcaaaaaatggggtacaaaggcggtggccttgggaagaatgcacaggggatt
gtcactccgattcagcccaaactgcgccccaggaacatgggtataggctttaacgatttc
aacgagacagaagataagaagaagggtttgttgggcagtgagcgtgtgggtgtagagaga
gtgaaggagaagcggttgtggtcgacgaagaagaagttggagaatgaagaggacttgaaa
gaggagaaggatagattgttagtcgtctctgagaggcagaagcggcagttgtatagtatg
gtagagatattgaatgtgttggatcaattggatgaagacagatccacaggtgagttgaca
ttggattcacttgccgagctattcattcagttgaagagtagatttgctgaggattataag
ctctgtaacttgtctgtcatcgcctgctcatatgctctgcctttgtttattagagttttc
cagggttgggaccctcttcaaaatccctttcacggctttgagattgtgtcactgtggaag
agtctacttctgagtgatcaagagtttactgcttcgccttattcccagttgatatcccaa
gttcttttaccagctgttagactttctgtcatcaatacttggcaggctagggaacctgaa
ccaatgctacggttcctggattcttggcaaaagttgttaccccattccgtcctccactac
atactggattacattgtcatgccaaaattaaatagtgcagtgggctgttgggaaccttta
cgcgaaactgttccaatccacctttgggtgcacccgtggttacggtatttgggacacaaa
ttggaaggtatcttcgagactatacgtttcaagttgagtcaacttcttgttgcttggcac
ccaagtgacgcatctgcctatactattttgtctccttggaattctgtgtttgattcagcg
agttgggaacaccttatgagcagatttatcgttccaaagttgcagcttattctgcaggag
ttccaactaaaccctgcaaatcagaagcttgatgagtttcattgggttatgaagtgggcc
tctgatattccaagtcatcttatggttgatatgatggtgaggttctttttttccaagtgg
caacaggttttgtatcattggttacaagcaagcccagactttgaggagataacaaattgg
tatttggaatggaaggaacttcttccgaaggagcttctcgcaaacgaaagtatccggtat
cagcttaatcgtggtcttgagatgatgaaccaggctgttgaaggtttggaggtggtccaa
ccttgtttggaagaaaacattggctattttagggtaccagagcaaaggcaatttgaggct
caacagaaagcagtaacacaacaatctgccatgagttttagcatggatgatatgagtgtt
aaggaagttattgaagcccatgcccaacaacacggcttactattcaagcctaaaccaggc
cggaggcatgatggtcaccagatctatgcctttggtaatttgagtgtgataattgatgct
ctaaatcaaaaggtgtatgctcaaattgaggaagggtggtccctagtatcccttcaagac
ttagtggacaagcaccagagttctctttcgtag
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