Quercus lobata (valley oak): 115982176 Help Entry 115982176         CDS       T07350                                  Name (RefSeq) cyclin-H1-1-like isoform X1   KO K06634   cyclin H Organism qlo  Quercus lobata (valley oak) Pathway qlo03022   Basal transcription factors qlo03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:qlo00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     115982176   09124 Replication and repair    03420 Nucleotide excision repair     115982176  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:qlo03021]     115982176    03400 DNA repair and recombination proteins [BR:qlo03400]     115982176 Transcription machinery [BR:qlo03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIIH      115982176 DNA repair and recombination proteins [BR:qlo03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TFIIH complex      115982176 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cyclin_C_2 Cyclin_N TFIIB Eaf7 RB_B Tmemb_161AB Motif Other DBs NCBI-GeneID:  115982176 NCBI-ProteinID:  XP_030960565 LinkDB All DBs Position 3:complement(12884042..12888892) Genome browser AA seq 337 aa AA seqDB search MADFQTSTHRANWIFTTQELDDKYNAARQRAIQTLDKYGATLMEVDVDGTLSYPEPQINS KDNADKHSRPKPLTIEEERYMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM QHNPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQLILNNEMIVYQSLEFDLIVYAPY RSIDGFVNDMEEFCPVKDDQLHVLKAIHETARMEVDKIMLTDAPLLFPPGQLALAALRSS NEVHKVLDFERYLRSILSRQSSAHTVSELIESLNSIDSWVRGYKFPSEKDLKHINRKLKS CWGLSSHDESKKREKKSKHKSKKSSNETQNVPSHTDL NT seq 1014 nt NT seq  +upstreamnt  +downstreamnt atggccgatttccagacctcgactcaccgagccaattggatcttcactactcaagagctg gatgataaatacaatgctgctcgtcaaagagcaatacaaacactagataagtatggagca acattgatggaagtagatgtggatgggacgttgtcgtaccctgaacctcaaattaactcg aaagataatgctgacaagcattctcgtccgaaaccacttactattgaagaagagcgatat atgcgagtgttctacgagaataaacttcaagaagtttgtaataacttccactttcctcat aaaattcaggcaacagctctaatatatttcaaaaggttttatctacaatggtcagtcatg caacataatcccaaaaacattatgttaacatgcatttatgctgcttgcaagatagaagaa aatcatgtttcagcagaggagctcggtaaggggatctctcaggatcatcaattgattctc aataatgagatgatagtttatcagagtttagaatttgatcttattgtttatgcgccatat cgctccattgatgggtttgtcaatgatatggaggaattctgcccagtaaaagatgaccag cttcatgtgctgaaggctatacacgaaactgcaaggatggaggttgataaaatcatgctt actgatgcaccacttctattccctcctgggcagttggcgttggctgctttgcgtagttca aatgaggtgcacaaagttctcgactttgagagatacctgaggagcattctctctcgtcag agttctgcacataccgtttcagagctcattgaatctctaaattcaatagattcttgggta agaggatataaattcccttcagaaaaagatttgaagcacatcaaccggaaactaaaatct tgctggggtcttagctcacatgacgagagcaagaaacgggagaagaaatcaaagcacaag tcaaagaagagttcaaacgaaacacaaaatgtgccttctcatactgatttgtaa

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