KEGG   Quercus lobata (valley oak): 115982228
Entry
115982228         CDS       T07350                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC5-like
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03020  RNA polymerase
qlo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115982228
  09124 Replication and repair
   03420 Nucleotide excision repair
    115982228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qlo03021]
    115982228
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115982228
Transcription machinery [BR:qlo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     115982228
  RNA polymerase III system
   RNA polymerase III
     115982228
  RNA polymerase I system
   RNA polymerase I
     115982228
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115982228
SSDB
Motif
Pfam: RNA_pol_N
Other DBs
NCBI-GeneID: 115982228
NCBI-ProteinID: XP_030960628
UniProt: A0A7N2LAS5
LinkDB
Position
3:62351636..62355312
AA seq 71 aa
MIIPVRCFTCGKVIGNKWDMYLDLLQSDYSEGDALDGLGLVRYCCRRMLMTHVDLIEKLL
NYNTLERNETT
NT seq 216 nt   +upstreamnt  +downstreamnt
atgataattccagttcgttgctttacctgcggcaaggtgattggaaacaaatgggacatg
tatcttgaccttctccagtcagattactctgaaggagatgcacttgatggattggggttg
gtccgttactgctgcagacgaatgcttatgactcatgtagatctcattgagaagcttctg
aattacaacactctggagaggaatgagaccacttga

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