KEGG   Quercus lobata (valley oak): 115982392
Entry
115982392         CDS       T07350                                 
Name
(RefSeq) protein GLE1-like isoform X1
  KO
K18723  nucleoporin GLE1
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03013  Nucleocytoplasmic transport
qlo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115982392
   03015 mRNA surveillance pathway
    115982392
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qlo03019]
    115982392
Messenger RNA biogenesis [BR:qlo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     115982392
SSDB
Motif
Pfam: GLE1
Other DBs
NCBI-GeneID: 115982392
NCBI-ProteinID: XP_030960836
LinkDB
Position
3:56569504..56577794
AA seq 627 aa
MGVIKLEPRCPQRIDGMAIDPEPHWKFDALLSELNSLETKLSSTTNVPAPFTKSTPSGKS
CKPFIMRVFEDEIDDTDSEGEEDHSSVAATRFNCDAIYLSSDSDDESTFKDQSYLMDEVR
IVEGALCELTHEHHLEDKEEIRNKISALETDLRSGSEKSTSALAQVEKYREARNEMDRKL
DTQYQRKIAEALDNHLTAVQRDHELRSQIEERKIRSDAAYEETKRREKALQEEKIRLEKS
KAESEARLRAEEAKRAALEAERRAALEAERRAVKETAERQAIETSTRVAARAAQEEDARR
QMNANSAKKSQSASNVLWAAESALNLEQARIQKLKEVDEGNQALRLTYNKDLSSYEKLIG
RLIRQISGSTEVVREKSREIIKIFNDPHCPQSVMVAAFAKLVVSRCTSPNTDAFACGHVI
VLVTSQVPHAMDLLLAEFHRACIYTVPKHITYSELAFECEEAYYQALGYRVIDRKLESTK
DYLTRLASYMELYGALIQTEVQGVQNTHGLKEGWAWIARFLNTLPANRYTAVALSAFLKM
AGFALFRKYKSQFMKVLSNILNNFLQELKACEDPGLNATILEIQSYLEDKRFLKEPVGRA
LQSSLLSTVSIPEGPDPDYHRSSGRYY
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgggtgtaataaagttggaacctcgttgtccccaaaggattgatggaatggcaatcgac
cctgaaccccattggaagtttgatgctttattatcagaacttaattcattggaaacaaag
ctcagttccactactaatgttcctgcgcctttcacaaaatcgacgccaagtggtaaaagt
tgtaagccttttataatgcgtgtgtttgaggatgagattgacgatactgacagcgaaggt
gaggaggatcatagttcggtggctgcaacacggttcaattgcgatgcaatttatttgagt
agtgattctgatgatgagtcgacttttaaagaccaatcctacttaatggatgaagtgcga
atagtagaaggtgctttgtgtgagctaacccatgaacatcaccttgaagataaggaggag
attaggaacaaaatttctgccttagagacagatttaaggagtggaagtgaaaagtctact
tctgcccttgctcaagttgagaaatacagagaagcaagaaatgaaatggataggaagctt
gatactcaataccaacgcaagattgcagaagcacttgataatcacttgactgctgttcag
cgggaccatgaattgagatcacaaatagaagaaagaaaaataagaagtgacgcagcttat
gaagagaccaaaagaagggaaaaggctctccaagaagaaaaaatacgcctagaaaaatct
aaagcagaatctgaggccagacttagagccgaggaagcaaaaagagctgctttggaagct
gagagaagagcagctctggaagctgagagaagagctgtgaaagaaactgcagaaaggcaa
gcaattgagacctcaacgagagttgctgctagggcagcacaagaagaagatgcaagacgc
caaatgaatgctaattcagcaaaaaaatcacaatcagcaagtaatgtactctgggcagca
gaaagtgctctaaatttagaacaggcaagaatacagaaacttaaagaggtagatgaagga
aaccaggctttgaggttgacttataacaaggatttgagcagctacgaaaagcttattggt
aggttgataagacaaataagtggatcgacggaggttgtccgtgaaaagtcacgtgaaatt
attaagattttcaatgatcctcattgccctcaatctgtcatggtggcagcatttgcaaag
ctggttgtctcccgttgtacgagccctaatactgatgcttttgcgtgtgggcatgtcatt
gttcttgttacctcacaggttccacatgcaatggatcttcttctagctgagttccacaga
gcctgcatttacactgttccaaagcatataacatactcagagttggcatttgaatgtgaa
gaggcttattatcaggctcttggataccgggtaattgacagaaagcttgagagcactaag
gactatttgacacggttagcatcctacatggaattgtatggagctctaattcagacagaa
gtacagggtgtccagaacacacatggcctgaaagaaggctgggcatggattgcgaggttc
ttaaatactttgcctgccaatagatatacagcggtagcactgagtgccttcctgaagatg
gcagggtttgctctcttcagaaaatataaatctcagttcatgaaggtactgagcaacatc
ttgaacaactttctgcaagaattgaaagcatgtgaagatccagggttaaatgcaaccatt
ctggagattcaatcctacttggaggataagaggttccttaaggagccagtgggaagggcc
ctgcaaagttctttgctttcaactgttagtattccagaaggaccagatccagattaccac
cggtcatcaggtagatattactag

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