KEGG   Quercus lobata (valley oak): 115982405
Entry
115982405         CDS       T07350                                 
Name
(RefSeq) coilin isoform X1
  KO
K13150  coilin
Organism
qlo  Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qlo03041]
    115982405
Spliceosome [BR:qlo03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    115982405
SSDB
Motif
Pfam: Tudor_Coilin Coilin_N
Other DBs
NCBI-GeneID: 115982405
NCBI-ProteinID: XP_030960850
LinkDB
Position
3:complement(56874922..56883478)
AA seq 614 aa
MESVRVRLEFKQRHLLKKSQLKEGLKRSWFLLKPEIETISDLTTHLLHNFDLLRSCPNGL
ILFMDGFVLPPFESTCILKDKDIVCVRRKGDKVFDSIKAGDGVDSIVVVDENVEEQGVVD
GLKLLANEEFDKECDDCGHERKVSKKRKASRKLHSPKRKKSKVAATDNCLVVPEDDQTNV
HAEDNGNLHHSGVHPKKRVKKDKSSKLPGERDKSSALGSNEKSNDTTKSTPNVKSRFCQL
QENGNESVNVSHGPGETKKLPSRSARRKKAKRQWLREQVKAESRKQYQGQIVKKDDEQSP
VKDKQKVSEEHDQPDEDSDEEGDVVPIVIRPGHIRFGRPSKDADPSVQQNEMPRENSQWN
GITCKKKGQKWGIEKNASHKWNDRMSWNQESSDMRTSERKTPATSPLDFDKLSPYTSMPK
EGDVIAYRLIELSSSWTPELSTFRVGKISRYYPESKRIFLVTVPEYPIDFEKIAEQSEEE
YGAQPAASLYGEDGSLKIDYSSLVDVRIVKHGNFNSGKAVVSEVNEVPVDNQTSVSGFGA
SNNNKETPAPTRENGEVNVWEEISQALDTKKAQLSQEDGWSREESSLKNGWSYRALRGSA
LGPTMARLRAQNGL
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggagagcgtgagggttcgtttggagttcaagcagcggcaccttctgaagaaatcgcag
ttgaaggaaggtctgaaacggagctggtttctcctcaaacctgaaatcgaaaccatctcc
gacctcaccactcatctccttcacaacttcgacctccttcgctcttgccctaatggcctc
atcctcttcatggatgggtttgtgttaccaccttttgaatcaacttgtattttgaaggac
aaagatatagtctgcgtgagaagaaaaggggacaaagtgtttgatagtatcaaggcaggt
gatggggtggactctattgtggtggtagatgagaatgtggaggagcaaggtgtggttgat
ggtctgaagcttttggcaaatgaggagtttgataaggaatgtgatgattgtggacacgaa
cgcaaagtttccaagaaaagaaaggcatcgaggaaacttcatagcccaaagaggaagaaa
agcaaggttgctgctactgataactgtcttgttgttcctgaagatgatcaaactaatgtc
catgcagaggataatggaaaccttcatcatagtggagtccacccgaagaagagggtcaag
aaggataaatcatccaaattaccaggtgaacgggataagtctagtgccctgggaagtaat
gaaaaaagtaatgacacaactaagtctacacccaatgtgaagagcagattctgccagctt
caagaaaatggcaatgaaagtgtcaatgtatcccatgggcctggcgaaactaaaaagctc
cctagtagaagtgctcggcgcaaaaaggctaaaagacaatggttgagggagcaagtcaaa
gctgaaagtagaaagcaatatcaggggcaaatagtcaaaaaagatgatgagcaatcacct
gttaaagataaacagaaagtttctgaagaacatgaccaaccagatgaagatagtgatgaa
gagggcgatgttgtacccatagtaattaggccaggacacatccgctttgggcgcccaagt
aaagatgcagatccatccgtccagcaaaatgaaatgccaagggagaattcccagtggaat
ggaataacctgcaagaagaagggtcaaaaatggggtattgagaaaaatgcttctcacaaa
tggaatgatcgtatgagttggaatcaagagagttctgatatgcgtacttctgaaagaaaa
acacctgcaaccagtcccttagactttgataagctttcgccttatactagcatgcctaag
gaaggtgatgttattgcatatcgtttgattgagttatcatcgtcatggacccctgaactt
tccaccttccgagtaggaaaaatatcacgctattaccctgaatccaaaaggatttttctg
gtaacagttccagaatatccaattgattttgagaagatagctgagcagtcagaggaggag
tatggagctcaacctgctgcatccctttatggggaagatggttctttaaagatagattat
tcatcacttgtggatgtccgcattgtcaagcatggtaacttcaattcaggaaaagcggtt
gtgagcgaggttaatgaagttcctgtggataatcaaacttctgtctcagggtttggggcc
agcaataacaataaagagacccctgcccccacacgagaaaatggagaagtaaatgtgtgg
gaagaaatcagccaggctttggacacaaagaaggcccagctctctcaggaggacggttgg
agtagggaagagagttcattaaagaatggatggtcctacagggccttaagaggcagtgca
ctgggtccaacaatggctcgtttaagagcacaaaatggactataa

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