Quercus lobata (valley oak): 115982667
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Entry
115982667 CDS
T07350
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115982667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115982667
Spliceosome [BR:
qlo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
115982667
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
115982667
NCBI-ProteinID:
XP_030961195
UniProt:
A0A7N2L8M4
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Position
3:complement(61698371..61704594)
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AA seq
485 aa
AA seq
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MATLADSFLADLDELSDNEADLIEEDEVGAGNMEEDVDGDMADIETLNYDDLDSVSKLQK
TQRYVDIMQKVEDALQNGSDMTNHGMVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIANEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEEILSKTIDACDRALALDAAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
VSLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQTTPPSLRMRACRILASK
STLAARVDSTRGDPSGKTGRGLREEICKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAA
KAAKRFKEKNYGSSGASSGLTSSLAFTPVQGIELSNPQAHAHQLGSGIQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttccttgcagaccttgatgaactatctgacaatgaagct
gatcttattgaggaagatgaagttggtgctggaaatatggaagaagatgttgatggggac
atggcggacatagaaactcttaactatgatgacctggatagtgtttcaaaattgcagaaa
acacagagatatgttgatattatgcagaaagtggaggatgcactccagaatggttctgat
atgacaaatcatggaatggttttggaagatgatcctgagtaccagctgattgtggactgt
aatgctttgtcggttgacattgagaatgaaattgttattatccacaattttatacgtgac
aagtaccggttgaaatttccagagcttgaatcacttgtgcatcacccaattgattatgct
cgtgttgttaagaagattgcaaatgaaatggatttgacccttgttgatctggaaggtctt
ttaccctcagctatcattatggtagtgtcagttacagcatcaactacaagtggcaagcca
cttcccgaggaaattcttagtaagaccattgatgcatgtgatcgagctcttgctcttgat
gcagcaaagaaaaaggtccttgactttgtagaaagtagaatgggttatattgccccaaat
ctttctgctattgttggtagtgctgttgcagcgaaactaatggggacagcaggtggtctt
gtatcattggctaagatgcctgcttgtaatgttcagcttcttggtgcaaagaaaaagaac
cttgctgggttttcaactgcaacatcgcaatttcgtgtgggttatattgaacaaacagag
atattccaaactacacctccttctttgaggatgcgtgcttgtcggatcttggcttcaaag
tcaacacttgcagcaagagtagattccaccagaggagatccatcagggaaaactggaaga
gggttacgggaagagatctgtaagaaaattgagaagtggcaagagcctccacctgcaaag
caacctaaaccactgccagtgcctgattctgagcctaaaaagaagagagggggtcgtcgg
ctaaggaagatgaaggaaagatatgcgattacagacatgaggaagctggctaataggatg
caatttggtgttccagaagagagttctttaggtgatggactgggggagggttatggaatg
cttggtcaggctgggagtggcaagctgcgggtatcagttggtcagagcaaacttgctgcc
aaagctgctaagaggtttaaggaaaagaattatggaagcagtggtgcctcctcaggattg
acttcaagtttagcatttacacctgtgcagggcatagagctcagtaacccgcaggctcat
gcccaccagcttggcagtggaattcaaagcacatacttctctgagacaggaacattttca
aagatcaagcggacctga
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