Quercus lobata (valley oak): 115982789
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Entry
115982789 CDS
T07350
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115982789
04121 Ubiquitin system [BR:
qlo04121
]
115982789
Enzymes [BR:
qlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115982789
Membrane trafficking [BR:
qlo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115982789
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115982789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_5
DZR_2
zf-ANAPC11
CxC4
zf-Nse
zf-C3H2C3
HypA
DZR
Motif
Other DBs
NCBI-GeneID:
115982789
NCBI-ProteinID:
XP_030961366
UniProt:
A0A7N2KN39
LinkDB
All DBs
Position
1:20700983..20703551
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AA seq
295 aa
AA seq
DB search
MSNVGYTHWCYQCRQRLRLEGESACPHCGEGFFEELSEISEDVLSNSEDDSTHPIPDLFE
LMYTLMRQRSPDPRWELMDVVNGFLTQSRMAGGNTSIDVRGRNGLLPEQGWNAFGSGQYV
VLNRIPSPSSNGSPGSGPGRADFDDYFMGPGFEAFIEHLSMNDRRGPPPASRSSIDAMPT
IRITQAHMHTDSHCPVCKEKFELGSEARQMPCNHIYHTDCIVPWLVQHNSCPVCRLELPP
QGNDSTRGSRSRGTGNNVSSSSSSSSSSSSSDYGGSGSRQNQGRRNAWANFWPFH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgttggatacacacactggtgctaccaatgcagacagcgcttaaggcttgag
ggagaaagtgcttgccctcactgtggtgaaggcttttttgaagaactcagtgagatatca
gaagatgtcctatccaattcagaagatgattctactcatccaatacccgatctatttgaa
ctcatgtacacattgatgaggcagaggagtcctgacccaagatgggaacttatggatgtt
gttaatggctttttgacccagagtagaatggccggaggaaacactagtatcgatgttagg
gggagaaatggtttgcttcctgaacagggttggaacgcttttggttctggtcaatatgtt
gtattgaatcgcattcccagtccatcctctaatggcagtccaggaagtggacctgggcga
gctgattttgatgactactttatgggccctggatttgaagcattcatcgaacatctttct
atgaatgatcgacggggtccacctccagcatctcgttcttcaattgatgcgatgcccact
attaggattacacaagcacatatgcacactgactcacactgtcctgtctgtaaggaaaaa
tttgagttgggctctgaagcaaggcagatgccatgtaaccatatttatcacactgattgt
attgttccttggttggttcagcacaactcatgccctgtttgccgccttgagctgcctcct
caagggaatgatagtactcgtggtagtcggagtaggggcacagggaacaatgtcagcagc
agcagcagcagcagcagcagcagtagtagcagtgactatggtggctctggtagtcggcag
aatcagggaaggaggaatgcatgggcaaatttttggccgttccactaa
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