Quercus lobata (valley oak): 115982897
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Entry
115982897 CDS
T07350
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115982897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115982897
03110 Chaperones and folding catalysts [BR:
qlo03110
]
115982897
03029 Mitochondrial biogenesis [BR:
qlo03029
]
115982897
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qlo04147
]
115982897
Enzymes [BR:
qlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
115982897
Messenger RNA biogenesis [BR:
qlo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
115982897
Chaperones and folding catalysts [BR:
qlo03110
]
Heat shock proteins
HSP60 / Chaperonin
115982897
Mitochondrial biogenesis [BR:
qlo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
115982897
Exosome [BR:
qlo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115982897
Exosomal proteins of other body fluids (saliva and urine)
115982897
Exosomal proteins of breast cancer cells
115982897
Exosomal proteins of colorectal cancer cells
115982897
Exosomal proteins of bladder cancer cells
115982897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF1192
Motif
Other DBs
NCBI-GeneID:
115982897
NCBI-ProteinID:
XP_030961511
UniProt:
A0A7N2KN85
LinkDB
All DBs
Position
1:complement(20871509..20875878)
Genome browser
AA seq
586 aa
AA seq
DB search
MASANAISTASILCSPKQSLRRNGNQQKQSNRLNFRQSSSRFVVRASAKEIAFDQHSRSA
LQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIRE
VASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVLGLVEELEKKAR
PVKGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID
RGYVSPQFVTNPEKMISEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTG
EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIENTSVEQ
LGLARKVTISKDSTTIIADAASKDELQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTIVPSIKDKIEDA
DERLGADIVQRALISPASLIAQNAGIEGEVVVEKIKVREWEIGYNAMTDKYENLVEAGVI
DPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTPMAAPPQGLTV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagccaacgctatctccaccgcctctattctctgctctcccaaacagagcttg
aggaggaatgggaatcagcaaaaacagagcaacaggctcaatttcaggcaatcgagtagc
cggtttgttgtgagggcttctgcaaaggaaatcgcattcgaccagcattcaaggtctgca
ttacaggccggaattgataagcttgccgatgctgttggccttactcttggtcctaggggg
aggaatgttgtgttggatgaatttggaagtcctaaagtagtaaatgatggagtcacaatt
gcgcgagctattgagctccccgatgctatggaaaatgctggggcagctctcattagggag
gttgcaagtaaaacaaatgactctgctggtgatgggacaacgactgcatcaattctggca
agggaaatcattaaactgggtcttttaagcgtcacttctggtgctaatccagtctcaata
aagaaggggattgataaaactgttctagggttggtagaagagttggagaagaaggctagg
cctgttaaaggtcgtgatgatatcaaagctgttgctaccatatctgctgggaatgatgat
cttattgggacaatgattgcggatgcaattgacaaggttgggccagatggtgttttgtcc
attgagtcctcatcttcatttgagacaaccgttgaagttgaagaaggaatggagattgac
agaggttatgtctcccctcaatttgttacaaaccctgaaaagatgatttctgagtttgag
aatgctagagtcttggttacggatcagaagatttcagcaataaaggacataattccactg
ttagagaagaccacacaattgagagcccctttacttataattgcagaggatgttactggg
gaggccttggctactcttgttgtaaataaactacggggcattctcaatgttgctgcaatt
aaagctcctggttttggtgagaggagaaaagctctccttcaagatattgccattttgaca
ggagctgagttccaagccagtgatctgggtctgcttattgagaacacctctgttgagcaa
cttggtctggctagaaaggtgaccatctccaaggattccaccaccattattgcagacgct
gcatcaaaggatgagttacaagcaaggattgcacagttgaagaaggaattggcagagaca
gattcagtttatgactcagaaaaactagctgagcgaattgccaaattgtctggtggggta
gctgtaataaaggtgggtgctgcaacagagactgaacttgaggaccgtaaacttcgtatt
gaagatgccaagaatgctacttttgcagccatagaggaagggattgtgcctggtggtggt
gctgcattggttcatctctcaactatagtaccttcaattaaggacaagattgaagatgca
gatgagcgactaggtgctgatattgttcagagggcactgatttctccagcatcactgata
gctcaaaatgccggaattgaaggtgaggtagttgtggagaagataaaggttagggaatgg
gaaattggctataatgccatgacagacaagtatgagaacctggtggaggctggagttatt
gatccagccaaggtgactcgatgtgcgctgcaaaatgctgcttcagttgcaggaatggtc
ctgaccactcaggccattgttgtggaaaagcctaagcccaagacacctatggctgctccc
ccacaaggactaactgtgtaa
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