KEGG   Quercus lobata (valley oak): 115983215
Entry
115983215         CDS       T07350                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A2 homolog 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115983215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qlo03019]
    115983215
   03041 Spliceosome [BR:qlo03041]
    115983215
Messenger RNA biogenesis [BR:qlo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     115983215
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     115983215
Spliceosome [BR:qlo03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    115983215
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3
Other DBs
NCBI-GeneID: 115983215
NCBI-ProteinID: XP_030961717
UniProt: A0A7N2R3J4
LinkDB
Position
4:67402227..67404673
AA seq 344 aa
MGSRRNDNPHYGDGASPGKIFIGGLAKDTTYETFVSYFEKYGKITDSVIMKDRHTHRPRG
FGFITYEDPSVVDQMIQETHVINGKQVEIKRTIPKGSGSAQANDIKTKKIFVGGIPTTVS
EDEFKSFFSKYGKVVEHEIICDHVTKRSRGFGFIIFDSEKVVDNILSNGNMIDMEGTQVE
IKKAEPKKASNPAHVPPAFGRDSRARSYNEDFGGFGDSYSSFGSGGYGPTSYRSLGGFGG
RLGNYGGYGGGNDFGGGYGDFGGAGFGGYQGESSFGYSSRYDSYMGGLGGGYGGSGLSGY
GRGSGGYGSYGGSGSPGASYGGPGGLYGSRAGYGGSSRYHPYAR
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgggttccaggaggaacgacaacccacactacggcgatggtgccagtcctggtaaaatc
ttcattggaggcttagccaaggacaccacctacgaaacctttgtgagttactttgagaag
tatggaaagataacagattctgttatcatgaaagaccggcacacacatcgaccaaggggt
ttcggtttcataacctatgaggatccttctgttgttgaccagatgatccaagagacccat
gtcatcaatggcaagcaggttgagatcaaaagaaccattcctaaaggttctggttctgca
caagctaatgatatcaaaacaaagaaaatttttgttggtgggattccaactacagtcagt
gaagatgagttcaagagtttcttctcaaagtatggaaaggtggtggaacatgagattata
tgcgatcatgtgactaaacgctctcgtggatttggatttattatatttgacagtgaaaaa
gttgttgataatattctgtcaaacggcaatatgattgatatggaaggtacacaggttgag
atcaagaaggctgaaccaaagaaagcctcaaacccagcacatgttcctcctgcatttggt
agagactctagggcacgttcatacaatgaagattttggtggatttggcgactcttatagt
agctttggaagtggtggttatggccctacttcttatagatcacttggcggttttggtggt
aggcttggcaattatggagggtatggtggtggtaatgattttggtggtggttatggagat
tttggtggtgctggtttcggtggttatcagggagagtcatcatttggctattctagtcgc
tatgattcctatatgggaggccttggtgggggatatggtgggagtggattaagtggatat
ggacgtggaagtgggggctatggaagttatggtggttcaggctcccctggtgctagttat
ggagggccaggaggattgtatggtagtagggcaggttatggtggcagtagtcgttaccat
ccctatgcacggtag

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