Quercus lobata (valley oak): 115983234
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Entry
115983234 CDS
T07350
Name
(RefSeq) disease resistance protein RPM1-like
KO
K13457
disease resistance protein RPM1
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
115983234
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
Rx_N
WH_DRP
LRR_14
LRR_4
AAA_14
AAA_16
AAA_22
LRR_8
NPHP3_N
LRR_EndoS
NACHT
CHASE3
AAA_25
AAA_18
ATP_bind_1
nSTAND3
Motif
Other DBs
NCBI-GeneID:
115983234
NCBI-ProteinID:
XP_030961734
LinkDB
All DBs
Position
4:complement(5393179..5404887)
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AA seq
675 aa
AA seq
DB search
MAEGVVSPLIDKLISLLSKEATMLQDIHEEVADIKDELESIQSFLKDADARAAAEEDISE
GVKTWVKQVREVAFRIDVFMDEYLLHVAQHHHPHPHHGFSSFLQKSARLITMLIPHHEIA
VKVQKIKALLQKIKERSEKYGFQSTGLGSSSSARNVRWHDPRKDSLYLDDRDVVGIESPR
DELIGWLVEGLSHRTVVSVVGMGGLGKTTLVKKVYDHQMVRGNFDCHAWIPVSQSYNIED
LLRSIIKQFCDSRKEPPLLGIDAMEEELLVNKLREYLWQKRYVVVFDDVWKIDFWEGIKH
ALLDSHMGGRILITTRNREVASFCKKSSPVHVYELQALPFNKAWELFCKRAFQFDFGGQC
PQALKNLSIDIVKKCEGLPLAIVAIGGLLSTKDKTVIEWQNLHDSLGFEFGRNPHLAGVN
KILSLSYEDLPYNLKSCFLYLGMYPEGYLINSARLIRQWIAEGFVKETEGKTLEQVSQEY
LIELIHRNLVQVSKADFDGKVRQCRLHDLLREIILQKMKDLSFCYNFSKHESSFEGLTRR
MSVNRVPYDVLKGFEDTHIHSLLLFNLDELPKFYMNTFCANFKLLKVMDFEDAPPDCIPE
DVGNLFHLRYLSLRNTKVKMLPKSIGKLQNLETLDLKQSLVFDIPVEINMLHKLRHLIAY
HRNNRIDFSLAWEKG
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcagagggggtagtatcccctcttattgacaagctgatttccttgttaagcaaagaa
gcaacaatgctacaggacatccatgaagaagtagctgacatcaaagatgaactggagagc
attcagtcctttctcaaggatgcagatgcaagggctgcagcagaggaggacatcagtgag
ggtgtcaaaacttgggtgaaacaagtaagagaagtagctttccgcatagatgttttcatg
gacgagtacttgcttcacgtggctcaacatcatcatcctcatccgcatcatggattcagt
agtttcctccaaaaatctgctcgcttgattaccatgttaatacctcaccacgaaatagct
gttaaagttcaaaaaatcaaagcattgctccagaaaatcaaggaaagaagtgaaaaatat
ggcttccaatccactggcctaggatcaagcagtagtgctcggaatgttaggtggcatgac
cctcgaaaggattctctttatcttgatgatagggacgttgtaggaattgaatctcctaga
gatgaattgattggctggttggtagaaggactgtctcatcgtacagtggtttcggtggtg
ggaatggggggactaggcaagaccactcttgtgaagaaagtctatgaccaccaaatggtg
agaggaaactttgactgccatgcttggattccagtgtctcaatcttacaatatcgaggat
ctacttagaagcataataaagcaattttgtgattctagaaaggagcctcctctattggga
attgacgcaatggaagaagagttgttggtcaataaattgagagagtacttatggcaaaag
aggtatgtggttgtatttgatgatgtatggaaaattgacttttgggagggtataaaacat
gccttactcgatagtcatatgggtggtagaattttgatcacaacacgtaatagggaggtt
gctagtttttgtaaaaaatcatcacctgttcatgtttatgagttgcaagcactacctttc
aataaggcatgggagcttttctgcaagagagctttccaatttgattttggaggacagtgt
ccccaagcattgaagaatttgtctattgacattgtcaagaaatgtgaaggattaccactt
gcaattgttgctattggtggccttttgtcaaccaaagacaaaactgtcattgaatggcaa
aacttgcatgatagccttggctttgagtttggaagaaatccccatcttgcaggtgtcaac
aagattctatctctaagttatgaagacctgccttacaaccttaaatcttgctttttatac
cttggtatgtatccagagggctaccttattaatagtgcaagactgattcggcaatggata
gctgaaggttttgtaaaagaaactgagggtaaaacactagaacaagtttcacaagaatac
ttgatagaattaatccacagaaacttggttcaagtatctaaggctgactttgatggaaaa
gttagacagtgtcgactccatgatctcttgcgtgagatcatcctccaaaagatgaaggat
ttgagtttttgttataatttctcaaaacacgagtctagctttgaaggactaactcgacgc
atgtcagtaaacagagttccatatgatgtacttaagggatttgaggacactcacattcat
tctcttttattgttcaatcttgatgaattgccgaagttctatatgaatactttttgtgct
aatttcaagcttttgaaagtaatggattttgaagatgctccaccggactgcattcctgaa
gatgtgggaaatttatttcacttaagatatttaagtttgagaaataccaaagtaaaaatg
cttccaaaatccataggaaagttgcaaaatctagagactctagatctaaagcagtcacta
gtgtttgatataccagttgagattaacatgcttcataagttgcgccatcttatagcctac
catcgcaacaaccgaatagatttcagtttggcttgggaaaaagggtaa
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