Quercus lobata (valley oak): 115983308
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Entry
115983308 CDS
T07350
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03440
Homologous recombination
qlo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115983308
03460 Fanconi anemia pathway
115983308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115983308
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
115983308
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HHH_8
DUF6429
EarA
DUF733
Motif
Other DBs
NCBI-GeneID:
115983308
NCBI-ProteinID:
XP_030961813
UniProt:
A0A7N2LCC5
LinkDB
All DBs
Position
4:13320883..13333002
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AA seq
664 aa
AA seq
DB search
MENQDRRVLCLENSELAAYLLSKRQELAEKPKGITENVDATLSKAYSNICNSKTHIQTLK
DLSQVKGVGKWILKLMQGFFETGSGSSEPEDLAGKGKKKKGMKRYVPQKNSVAYALLITL
HRGTTNGNEFMRKQELIDAAEASGLSRVPIGPEKGKGKPAQFGSSTRDWYTGWSCMKSLI
TKGLVAKSSCPAKYMLTQEGQEAARECLMRSGLVNPAENLANAEVYSDQGAHTPDIDFTP
PEKKVPSASTGLSRRRKSMDVPLESLERFMRMGYSKEQVLAAFAEVSESSQKEISSLWPA
VLCCLREDQVYGLHSGSQSVREDCHAMSNAYTNSNGQGEGRLIESSHDGGHMPEFYSSVT
APNSFTLRACSSSDQPLQKSRTDGLKVNMNSLSMPPLSFGERFEDAYEVVLILDDREQFA
TQGSRSRRIIENICSQYKIKIEVRRLPVGDGIWIAHHKYLDSEYVLDFIVERKKVDDLRS
SIRDNRYKDQKLRLRRCGLKKLIYVVEGDPNSSEAAESIKTACFTTEILEGFDVQRTSGL
ADTLKKYGHLTQAILQYYKSVLPEDHSKCTGVCPPFDEFVKRCQDLDKMTVSDVFAIQLM
QVPQVTEEIAVAVLDLYPTLLSLARAYSLLEGNTGAQEEMLRRQSNNVINAVASRNIFQL
VWGN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcaagatagacgcgtgttgtgcttagaaaactcggagctggcggcgtaccta
ttgagcaaaaggcaagaactcgccgaaaaaccaaaagggatcacggagaacgtcgacgct
acactctccaaagcttactccaatatctgcaactccaaaacccatatccaaaccctcaaa
gacttgtctcaagtcaagggtgtgggaaaatggatcctaaaacttatgcaagggttcttt
gagactggttcaggcagttctgaaccggaagacttggcaggaaaaggcaagaaaaagaaa
ggaatgaaacgctatgtaccacaaaagaattctgtggcatatgcgttgttgattaccctt
cacaggggtactacaaatgggaatgaatttatgcgtaaacaggagcttattgatgcggct
gaagctagtgggctttctcgggtgccaattgggccagaaaagggaaaagggaaacctgca
caatttggaagttccacaagagattggtatacgggatggagctgcatgaagtcattgata
accaagggattagttgcaaaatcaagttgccctgcaaagtacatgctaacgcaagaaggt
caggaagcagcacgtgaatgtctcatgagatctggtttggttaatccagcagagaacttg
gctaatgcagaagtttattctgatcagggtgcacatacaccagatattgattttactccc
cctgagaaaaaagtgccatccgcatctactggtttgagtaggcgtaggaaatcaatggat
gttccacttgaatcacttgagaggtttatgcgcatgggttactccaaggaacaagttctt
gctgcttttgctgaagtttcagagagttctcagaaggagatctcatcactctggccagca
gttttatgttgtcttcgagaggatcaagtttatggtttgcattctgggtcccaatctgta
agagaggattgtcatgcaatgtcaaatgcttacactaattcaaatggtcaaggtgagggt
agactgatagagtcttctcatgatggtggacatatgccagagttctattcttctgttact
gcaccgaactcttttaccttgagagcttgctcatcatcagatcaacctttgcaaaagtca
aggacagatggtttgaaagtaaatatgaattctttaagcatgccacctttaagctttggg
gagagatttgaggatgcatatgaagtggtcttgatattggatgatcgagaacaatttgcc
actcagggatcgcggtctaggagaattattgagaatatttgtagtcaatacaaaatcaaa
atagaggttaggcggttaccagttggtgatgggatctggatagctcaccataaatatctt
gatagtgaatatgtacttgattttattgttgagaggaagaaagttgatgatttacgcagc
tcaatcagggataatcgctataaggatcaaaaattaaggcttcggaggtgtggacttaag
aagctgatttatgttgtggagggcgacccaaattcttctgaagctgctgaaagcatcaaa
acagcttgttttacaacagagattctggagggatttgatgtgcagagaacaagtggtttg
gctgatactttaaagaagtatggtcatcttacccaagcaatattgcaatactacaaatca
gtgctgcctgaggatcattctaaatgcactggagtatgtcctccttttgatgaatttgtc
aaaaggtgtcaagacctggataaaatgacggtcagcgatgtatttgccattcagctcatg
caggtcccacaagttacagaggagattgctgttgctgttttagatttgtacccaaccctt
ctatctcttgcccgtgcctactctcttcttgagggcaacacaggtgcacaagaggagatg
cttaggaggcagagtaacaatgtgatcaatgcagttgctagtaggaatatatttcagtta
gtttggggcaactaa
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