Quercus lobata (valley oak): 115983684
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Entry
115983684 CDS
T07350
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115983684
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
qlo01002
]
115983684
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115983684
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115983684
Peptidases and inhibitors [BR:
qlo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115983684
Ubiquitin system [BR:
qlo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115983684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
ubiquitin
Malt_amylase_C
pP_pnuc_2
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
115983684
NCBI-ProteinID:
XP_030962277
LinkDB
All DBs
Position
4:49526658..49571116
Genome browser
AA seq
1131 aa
AA seq
DB search
MTLMTPPPLDQQQQPQPQPQPQPQPQQEDDEMLVPNTDLLEGPQPMEVAQAETTSTVEAQ
AVDDPPSARFTWTIDNFSRLNTKKLYSDVFFVGGYKWRILVFPKGNNVDHLSMYLDVADS
TNLPYGWSRYAQFSLSVINQIHNKYSIRKETQHQFNARESDWGFTSFMPLGELYDPGRGY
LVNDTCIVEADVAVRRVVDYWSHDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKNV
YHMPTTENDMPTGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNR
VLSEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVY
ASFDKYVEVERLEGDNKYHAERYGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKI
NDRYEFPLELDLDRENGKYLSPDADKTVRNLYILHSVLVHSGGVHGGHYYAYIRPTLSDQ
WFKFDDERVTKEDVKRALEEQYGGEEELPPANPGFNNSPFKFTKYSNAYMLVYIRESDKE
KIICNVDEKDIAEHLRIRLKKEQEEKEQKRKEKAEAHLYTIIKVARNEDLLEQIGRDIYF
DLVDHDKVHSFRIQKQNSFNLFKEDVAKDLGIPVQFQRFWLWAKRQNHTYRPNRPLTPQE
EAQSVGQLREVSNKANNAELKLFLEVELGQDLQPVPPPERTKEDILLFFKLYDPSKEELR
YVGRLFVKGSGKPVEILPKLNEMAGFSAEEEIELYEEIKFEPTIMCERIDKKVTFRSSQL
EDGDIVCFQKSPQVGSSDQCRYPDVPSFLDYVHNRQVVRFRSLEKPKEDEFCLELSKLHD
YDDVVERVAQHLGLGDPSKIRLTSHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILY
YEVLDIPLPELQGLKTLKVAFHHSTKDEVVIHTIRLPKQSTVGDVINDLKTKVELSHPNA
ELRLLEVFYHKIYKIFPLSEKIENINDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFMKDT
AQNQVQVQNFGEPFFLVIREGETLAEVKERIQKKLQVPDEEFSKWKFAFLSLGRPDYLQD
SDIVSSRFQRRDVYGAWEQYLGLEHTDNAPKRSYAANQNRHTYEKPVKIYN
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgactctgatgactcctccacccttagatcagcaacagcagcctcagcctcagcctcag
ccgcagccgcagccgcaacaggaagatgatgagatgttggttccgaacacagacttgctc
gaaggccctcagcccatggaagtagctcaagcagaaaccacaagcacagtggaagctcag
gccgtggatgatccaccatctgcgaggttcacttggacaattgataatttctcaaggctt
aatacaaagaagctctactctgatgttttttttgtcggaggctacaaatggcgaatacta
gtcttcccaaaggggaacaatgtcgatcatttgtctatgtatctagatgttgcagattca
acgaatttgccttatggctggagtagatatgcccagttcagcttgtctgttatcaaccaa
atccataataaatactcaattagaaaagaaacacagcaccagttcaatgcacgtgagagt
gattggggtttcacttcattcatgcctcttggtgaactttatgaccctggtagaggttat
cttgtgaacgacacatgcatagttgaagctgatgttgccgtacgtagagttgttgattat
tggtcacatgactcgaagaaggagactggttttgttggacttaaaaaccagggagctaca
tgctacatgaattctcttcttcagactctctatcatataccttacttcagaaagaatgtg
tatcatatgccaaccactgagaatgatatgccgacggggagcatccctctggctttgcag
agtttattttacaagctccaatacagtgacactagtgtagcaacaaaagagctgacaaag
tcttttggatgggacacatatgattcatttatgcagcatgatgtgcaagaacttaatagg
gttctttctgaaaagctggaagataaaatgaagggaactgttgtggagggtacaatacag
cagttatttgaagggcaccatatgaattatattgaatgcatcaatgtggactataagtca
acaagaaaagaatcattttatgatcttcagcttgatgtcaaaggttgtcgggacgtttat
gcttctttcgacaagtatgtggaagtggaacgtcttgagggtgataataagtatcatgcc
gaacggtatggtttacaggatgctaggaaaggtgttttgttcattgattttccgcctgtc
cttcaacttcagctaaaaaggtttgagtatgattttatgcgggataccatggtaaagata
aatgaccgctatgagttccctttggaacttgatcttgatagagagaatggcaaatatcta
tcgccagatgcagataagactgttcgcaacctctacattcttcacagtgttttggttcac
agtggtggggtgcatggtggacactactatgcatatatcaggccaaccctatctgatcag
tggtttaaatttgatgatgaacgagtgacaaaagaagatgttaagagggcactagaggag
cagtatggtggtgaggaagagttgccaccagcaaatcctgggttcaacaactctccattt
aagtttaccaaatattcaaatgcatatatgcttgtatatatacgcgaaagtgacaaggag
aaaataatttgtaatgtggatgagaaggacattgcagaacaccttaggataaggttgaag
aaagaacaagaagaaaaggaacaaaagagaaaggaaaaagctgaggcgcacctctacacc
atcataaaggttgcacgtaatgaggacctacttgaacagattggaagggatatatatttt
gatcttgtagatcatgacaaagttcatagttttcgtattcaaaagcagaattcgtttaac
cttttcaaggaagatgttgccaaggatttgggtataccagtgcaatttcaacggttttgg
ctttgggcaaagcgccaaaaccatacatacaggccaaatcgaccactgacacctcaggag
gaagcacaatcagttggacagttgagagaggtttccaataaggcaaataatgcagaactt
aagctgtttctagaagtagaacttgggcaggatttgcagcctgttcctcctcctgaaagg
acgaaagaagatattctgctattctttaagctatatgacccatcgaaagaggagctccga
tatgttgggaggctttttgttaagggtagtggtaagccagtggaaatattgccaaaacta
aatgaaatggctggattcagtgctgaagaagaaattgaactttatgaggaaataaagttt
gaacctactatcatgtgtgaacgcattgacaagaaggtgactttccgttcgagtcagctc
gaagacggggacatcgtttgctttcagaaatcccctcaagttggaagcagtgatcaatgt
cgctatccagatgttccttcattcttggattatgtgcacaatcgtcaggttgttcgcttt
cgatctttggagaaaccaaaggaggatgaattctgtcttgagttgtcaaaacttcatgat
tatgatgacgtcgtggaaagagtagcccagcatcttggcttgggtgatccatccaaaatc
aggctcacatctcataactgttattcccagcaacctaaaccccagcctattaagtaccga
ggagtggaacatttgtctgacatgctagtccactacaatcagacttctgatattctctat
tatgaagtattggatatacccctgccagaattgcaaggcctaaaaactttgaaagttgct
tttcatcattctacaaaggatgaagtagtgattcatactattagattaccaaaacagagc
actgtgggagatgttattaatgacctaaagacgaaggtagagttgtctcatcccaatgca
gaactcagattgcttgaagttttctatcacaagatctataagatcttcccactcagtgaa
aagattgagaatattaatgatcaatactggacattacgtgctgaggaggttcctgaagag
gaaaaaaaccttggtcctcatgatcgcttaattcatgtttatcattttatgaaggacaca
gctcagaaccaggtgcaggttcaaaattttggagaaccatttttcttggttatccgtgag
ggtgagacattagctgaagttaaggagcgcatacagaaaaagttgcaagtacctgatgag
gagttttctaagtggaagttcgcatttttgtctttgggtcgtccagattatctccaggac
tctgacattgtgtccagtcggtttcagagaagggatgtttatggtgcttgggagcagtat
cttgggttggaacacactgacaatgctcctaaaaggtcatatgcagctaatcagaatcgt
cacacatatgagaagccagtgaaaatctacaattag
DBGET
integrated database retrieval system
