Quercus lobata (valley oak): 115983722
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Entry
115983722 CDS
T07350
Name
(RefSeq) protein AUXIN SIGNALING F-BOX 3-like
KO
K14485
transport inhibitor response 1
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
115983722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115983722
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115983722
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
115983722
NCBI-ProteinID:
XP_030962341
UniProt:
A0A7N2LCJ0
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Position
4:complement(18206904..18212576)
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AA seq
597 aa
AA seq
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MDFSLPTEPMNHKRKNPDPSPDSDESTTQLSSPFPDEVLERVLSLLNSRKDRNSVSLVCK
DWYDAERWSRTHVFIGNCYSVSPEILTRRFPNIRSVTLKGKPRFSDFDLVPPKWGAYVHS
WLLVFATKYHFLEELRLKRMTVSDENLKLLALSFPNFKALSLLSCDGFSTDGLASITTHC
KNLTELDIQENDIDDKSGKWLSCFPENFMSLEVLNFANLNSDVNFEALERLVSRCKSLKV
LKVNENMTLEQLHRLLVLAPHLRELGTGSLLQELTPRQHSELKSAFNNCKNLNMLSGFYE
VTSIFLPVLYPACTSLTFLNLSYAALRSDELSNLLVHCPLLQRLWVLDSVEDEGLEAVGS
NCPLLEELRVFPASDPFEDEILHGVTEAGFLAVSYGCKKLHYVLYFCRQMTNAAVATIVQ
NCPDFTHFRLCIMNPRQPDYQTNEPMDEAFGAVVKTCTKLRRLAVSGLLTDLTFEYIGKY
ANNLETLSVAFAGSSDRGMECVLKGCPKLRKLEIRDCPFGNAALLSSFRKYESMRSLWMS
GCKVTMDGCRLLAQEMPRLNVEVIRECGNDGFQADKLYVYRSVAGPRKDAPSFVLTL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggatttttctctacccactgaacccatgaatcacaagagaaaaaacccagacccatct
cctgactcggacgagtcaacaacccagctatcctcaccattcccagacgaagttctcgaa
cgagttctctctctcttaaactccagaaaagaccgtaactcggtctctctagtctgcaaa
gactggtacgatgctgagcgctggtcaagaacccacgtgttcatcggaaactgctactca
gtctcgccggagatactgactcggcgattcccaaacattcgtagtgtgaccctcaaaggg
aaacccaggttctcggatttcgatctggttccacccaaatggggtgcgtatgttcactct
tggttgctcgtttttgcgaccaagtatcactttcttgaggagcttaggcttaagagaatg
actgttagtgatgagaacttaaagcttttggctctttcttttcctaattttaaggctctc
tcgcttttgagctgtgatgggttcagcactgatgggcttgcctccattaccactcattgc
aagaatttgaccgagctcgatatacaagagaatgatatcgatgataaaagtggtaaatgg
ttgagttgcttccctgaaaacttcatgtcactggaagtactaaactttgccaatttgaat
agtgatgttaattttgaagctcttgagagactggttagtaggtgcaaatcgttgaaagtt
ttaaaggttaatgaaaatatgaccttggaacaattacacaggctgcttgttcttgctcct
cacttaagggagctaggtactggttcacttttgcaagagcttacgccccgccagcactca
gagctcaaaagtgcattcaacaattgcaagaatctaaacatgctctctggtttttatgaa
gttacatccatatttcttccagttctttaccctgcctgtacaagtttgacattcttgaat
ttgagctatgctgctttgcgaagtgatgaattgtctaatcttcttgttcattgcccactt
cttcagcgcctctgggtcctggactcggttgaagatgagggattggaagcagtcggatca
aactgtcctctacttgaggaactccgtgtcttccctgcatctgatccgtttgaggatgaa
attttacatggggtgactgaagctgggttcttagctgtgtcatatggctgcaagaaactc
cactatgttctctacttttgccgacagatgactaatgctgcagtagcaaccattgtgcag
aactgccctgatttcacccacttcaggctttgcataatgaacccacgccagccagattac
caaacaaatgaacccatggatgaggcttttggtgcagtggtgaaaacttgcactaaactc
cggaggcttgcagtttcaggtttattgactgaccttacatttgagtacattgggaagtat
gccaataacttggaaacactttctgttgcatttgctggcagcagtgataggggcatggag
tgtgtattgaaaggttgtccaaagctgaggaaacttgagataagggactgcccgtttggg
aatgcagctttgctatcaagtttcaggaaatatgaatcaatgaggtcactctggatgtca
ggctgcaaagtgacaatggatggctgtagattgttggcacaagagatgcccaggttgaat
gtggaggtaataagggaatgcgggaatgatggttttcaggctgataaactttatgtttat
cgttctgttgcagggccaagaaaggatgccccatcttttgttctcactctttga
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