Quercus lobata (valley oak): 115984169
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Entry
115984169 CDS
T07350
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03020
RNA polymerase
qlo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115984169
09124 Replication and repair
03420 Nucleotide excision repair
115984169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115984169
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115984169
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
115984169
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
115984169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
115984169
NCBI-ProteinID:
XP_030962955
UniProt:
A0A7N2LBA7
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All DBs
Position
4:8508729..8512594
Genome browser
AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTVGNILRMQLHRDPNVLFAG
YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNGFETEMAKHSREF
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcccgatcgatacgaacgcttcgtcgtccccgaaggcaccaaaaaggtctcg
tacgagagggacacgaagataatcaacgcggcgtcgtttacaatcgagagagaagaccac
accgtcggcaacattcttcgcatgcaattgcacagggaccccaatgttctcttcgctggc
tacaagcttcctcacccacttcagtacaaaatcattgttaggatacacaccactagccag
tcatcaccaatgcaggcatataaccaggctatcaatgatctggacaaggagcttgaccat
ttgaagaatggtttcgagactgagatggcaaagcattcaagggagttctaa
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