KEGG   Quercus lobata (valley oak): 115984364
Entry
115984364         CDS       T07350                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG4-like
  KO
K16280  E3 ubiquitin-protein ligase RGLG [EC:2.3.2.27]
Organism
qlo  Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:qlo04121]
    115984364
Enzymes [BR:qlo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115984364
Ubiquitin system [BR:qlo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    115984364
SSDB
Motif
Pfam: Copine zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4 Prok-RING_4 vWA-TerF-like Sina_RING zf-RING_UBOX zf-RING_2 zf-RING_5 TerY_C IBR_2 IBR_1
Other DBs
NCBI-GeneID: 115984364
NCBI-ProteinID: XP_030963241
LinkDB
Position
4:complement(95706308..95724820)
AA seq 419 aa
MGGRFSKRNRSLSRRRSVASSGEGRTGSSHHHHNPVTAAISRLPSMTSTSNGPNIGAGGK
SSAKKKYAFIPDNYHTLEEVTAALRTAGLESSNLIVGIDFTKSNEWTGKTSFNNRSLHAI
GDTPNPYEKAISIIGKTLSPFDEDNLIPCFGFGDATTHDQEVFSFHNDHTPCHGFEEVLS
CYKKIVPNLRLAGPTSYAPVVEAAIDIVEKSGGQYHVLVLIADGQVTRSVNTSEKELSPQ
EEQTIKSIVNASSYPLSIVLVGVGDGPWEDMKNFDDKIPAREFDNFQFVNFTAIMSKNVS
PSEKETAFALAALMEIPIQYQAARELGILGRATGRAKKIVPRPPPVPYSRPQMPTPQPSS
LPSTEADERNQAVCPICLTNAKDLAFGCGHLTCQDCGARLSNCPICRQPIRNRLRVFTG
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgggtggcagattttcaaaacgtaataggagtttaagtaggcggagaagtgttgcaagt
tcaggggaaggaagaacggggtcatctcatcatcatcataatcctgttacagctgctata
tccagactaccatcaatgactagtaccagtaatggaccaaatataggagcaggaggaaag
tcttcagccaagaagaaatatgctttcatccctgataattaccatacccttgaagaggtt
actgcagcattgagaacggcaggtctagaatcatcaaatcttatcgttggaattgatttc
actaaaagcaatgaatggacaggcaaaacctcattcaacaaccgaagcctgcatgccatt
ggagatacacctaatccatatgagaaggcaatctctatcattgggaagactttatcccct
ttcgatgaagacaacttaattccttgttttggttttggtgacgcgacaactcatgatcag
gaagtgtttagttttcacaatgatcatacaccttgccatggttttgaagaagttttgtcc
tgctacaaaaaaatagttcctaacttgcgacttgcagggccaacttcttatgctccggta
gttgaggctgcaattgacattgtagagaaaagtggtggacagtaccatgtactggttctc
attgctgatggccaggttacaagaagcgtcaatacaagtgagaaagaactaagtccacaa
gaagagcaaacaatcaaatcaattgtcaatgcgagttcatatccactctcaattgttctt
gtcggagttggtgatggaccctgggaagacatgaagaactttgatgacaagatccctgca
cgtgaatttgataattttcagtttgttaacttcactgcaattatgtctaaaaatgtatcg
ccctcagagaaagaaacagcttttgctctagctgccctaatggagatccccatccagtac
caagcagcaagggaacttggcatacttggacgtgcgacaggaagagcaaagaaaattgtt
ccacgccctcctccagttccgtacagtcgtcctcaaatgccaactcctcagccaagcagc
cttccatcaacggaggcagatgaacgaaaccaggcggtttgccctatttgtttaacgaat
gcaaaggacttggcctttggctgtgggcacctgacttgtcaggactgtggagctagattg
agtaactgtccaatatgtcgtcaaccgatcagaaaccgtctcagggtgttcacggggtga

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