Quercus lobata (valley oak): 115984384
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Entry
115984384 CDS
T07350
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115984384
Membrane trafficking [BR:
qlo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
115984384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
115984384
NCBI-ProteinID:
XP_030963279
UniProt:
A0A7N2LGQ2
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Position
4:36064346..36075197
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AA seq
1419 aa
AA seq
DB search
MASSPPFEVEDHTDEDFFDKLVNDEIEFTGSVPSVVKNDALDEAKAVSNIRISEVGAAGV
DSGGNDVLEVNDEMGHEDLVVSAASLDANEENVVGEVSNSLVPGNTDESNSVVGEESVPS
VVIPNETNEGSEVGKGEEGALHSSVGESSVSVGTGVKVVQWSSFESEVDDNGGEFGTYSE
FFSELKDNSQDPFENVMNMGKLGTESNFVDGVSENPVADLGASNYGQHQEGQYYGAVTGQ
NIDGQDLSSSQNWENLYPGWKYDTNTGQWYQLEGYDANASSSADINVNANDHANADAVLS
DHTVGGYYQQQTAQAQSVVGTVDDGCTTGSVSNWNQISQGNMQYPAHMVFDPNYPDWYYD
SITKEWKLLETYTPASNQLTSVDYNQQYQNQNVENHQSQSLVSQEHVANWDGSASNYNNQ
TVNMWQTQHVAKSDTIGFTENQKLGNHYSSTGHLTDSVNQQSGFVPRGSLAQYEQPNQSV
DSGRRVAEFQSFIPDENFYQHQNQAKDLNQHMHFSPAHLGNQKPVNFSQQLPQSGTQFSY
APSEGRSSAGRPPHALVTFGFGGKLIVMKDNSSFLRNSYESQDSVGCVLNVLNLMEVVMD
KNDSSSFGLGACDYFYALCQQSFPGPLVGGSVGSKELNKWIDEKIATCESPIVDYRKSED
LRLLFSLLKISCQYYGKLRSPFGTDQALKESDCPESAIAKLFTTSKRKSAYGALAHCLQS
LPSEAQIQATALEVQSLLVSGRKKEALQCAQGGQLWGPALVLASQLGDQFYVDTVKQMAL
NQFIAGSPLRTLCLLIAGQPAEVFSSATISGTLPGSVDFFQQPVKSGANCMLEEWEENLA
VITANRTKDDELVIIHLGDCLWKEHGETTAAHICYLVAEASIEPYSDAARLCLIGADHLK
FPRTFASPEAIQRTELHEYSKVLGNSQFLLLPFQPYKLIYAHMLAEVGKVADALKYCHAI
LKFLKTGRAPEVDTWRQLVLSLEERIRTHQQGGYGSNLAPTKLVGKLLTFIDSTAHRVVG
GLPPPVPSTSHSGAQHNEYASQPGGLKVSNSQSTMAMSSLMPSASVEPIYERAAENKMPN
RSVSEPIFGSAPKKVDSSKETNSSDTQGKASASGGSSRFGRFGSQLFQKTVGLVLRSRPD
RQAKLGEKNRFYYDEKLKRWVEEGAELPPPEEAALPPPPTTAAFQNGMPDYNVKDAPKTG
GFPLELGLETKSPISSERSSGIPPIPPGSNQFSARGRMGVRSRYVDTFNKGGGTPSNLFQ
TPSIPAAKPGGGSNPKFFIPAPVASVVETVQTPGESMQEATLNNANPPTSFKEDSISSTQ
KSTLPSMSLQRFPSMDNIVQRKTGPMAHGTSLVPPPSRRTASWSGNLSDGWNPSMMNEVK
PLGEVLSISPSLYRPGDPLSVQFPSSRNSSRDDLHEVEL
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctcctccatttgaggtggaggatcatacggatgaggatttttttgataaa
cttgttaatgatgaaattgaatttactggatctgtgcctagtgttgtaaagaatgacgct
ttagatgaggcaaaagcggtttctaatataaggattagcgaagtgggggctgccggagtt
gactctggtggcaatgatgttcttgaggtcaatgatgaaatgggccatgaagatttggtt
gtgtctgctgcatcattggatgccaatgaggaaaatgtggttggtgaagtgagcaattcg
ttggtacccggtaatactgacgagtctaatagtgtggttggcgaagagagcgttccatca
gtagtgatacccaatgaaacaaatgagggtagcgaagtggggaaaggggaggaaggtgca
ttgcatagttcagtgggtgagagtagcgtgtctgtgggaacgggtgtgaaagttgttcag
tggagttcatttgagtcggaggtggatgataatggtggtgaatttgggacgtactcggaa
ttctttagtgagttgaaagataactcgcaagacccatttgagaatgtgatgaatatgggc
aagttggggacagaatctaattttgtggatggtgtttcggaaaacccagttgctgatttg
ggggcctccaattatgggcaacatcaagaaggtcaatactatggggcagttacggggcag
aatatagatggtcaggatttgagtagcagtcagaattgggaaaatctttatccagggtgg
aagtacgacacaaacactgggcaatggtatcagttggagggttatgatgcaaatgcaagt
tcaagtgctgatattaatgtgaatgcaaatgatcatgcaaatgcagatgcagttctttca
gaccacacagtaggtggttattatcagcagcaaacagctcaggctcagtctgttgttgga
actgtggatgacggatgtacaactggcagtgtctctaactggaatcagatttcccaagga
aatatgcaatacccagctcatatggtatttgatcccaattatcctgattggtactatgac
agcatcactaaagaatggaaattgttggaaacatacactccagcttcaaatcagttaaca
agtgtagattataatcagcaatatcaaaatcagaatgtggagaatcatcagtcacaaagt
ctagttagtcaagaacatgttgcaaactgggatggatctgcgagcaattacaataaccaa
actgtgaatatgtggcaaactcaacatgttgcaaagagcgacacaattgggtttactgaa
aaccagaaattagggaaccattacagttccactggtcatttaactgattctgtgaatcaa
cagtcggggttcgttcctcgtggatcacttgctcagtatgaacagccaaatcaaagtgtt
gacagcggccgtagggttgctgagtttcaaagctttattcctgatgaaaatttttatcag
caccaaaatcaggccaaggacctaaatcaacacatgcatttctcacctgctcacttgggt
aatcagaaaccagtgaatttttcacaacagctgccacagagtggaactcagttctcttat
gcgccaagtgaggggaggtcatctgcaggacggcctccacatgctctagtcacttttggt
tttggtgggaaacttatagtcatgaaagataatagttcttttctcagaaactcatatgaa
agccaggactctgtaggatgtgtgcttaatgttctcaacttgatggaagttgtcatggac
aaaaatgattcttcaagctttggattgggtgcttgtgattatttttatgcattgtgccaa
caatcttttcctggtcccttggttggtgggagtgttggaagtaaggagttaaacaaatgg
attgatgaaaagattgctacctgtgaatctccaattgtggattataggaaaagtgaagat
cttaggttgcttttttctttgctgaaaatatcatgtcagtattatggaaaacttcgatca
ccttttggcactgaccaagccttgaaggaaagtgattgtcctgagtcagctattgctaag
ctctttacaacttccaaaagaaagagtgcgtatggtgcacttgcacactgcttgcagagc
ttgccttctgaagcccaaattcaggctactgcacttgaggtacagagtcttcttgtctct
ggtaggaagaaagaggctttgcaatgtgcacagggaggtcaactgtggggaccggcactt
gttcttgcatctcaacttggggatcagttttatgttgatactgtgaagcaaatggcactt
aaccaattcatagctggatcacctttgcggactttatgcctgcttattgctgggcagcct
gcagaagtgttttctagtgccactattagtggcaccttacccggttctgtagattttttt
caacagcctgtcaagagtggggctaactgcatgttagaggaatgggaagagaatttagct
gtcataactgcaaatagaacaaaagatgatgagcttgtcatcattcatctaggagattgc
ctatggaaggagcatggggagactactgctgcacacatatgttatttagttgcagaagcc
agcattgaaccatattcggatgctgcaagactctgtcttattggtgcagatcatttgaaa
tttccacgaacatttgccagccctgaggcaatacagaggacagaattacatgagtactca
aaggtgcttgggaattctcagtttctcctcctaccttttcagccatataagcttatatat
gcccacatgctggctgaagttggaaaagttgcagatgctttgaagtactgccatgcaatt
ttgaagtttctcaagactggtagagcaccagaagtggacacatggagacaattagtgttg
tctcttgaggagcggattagaacccaccagcagggtggttatggatcaaatttggctcca
accaaactggttggtaaattgcttaccttcattgacagtactgctcatcgtgttgttgga
gggctacctccacctgtaccttcaacatcacatagtggtgctcaacataatgaatatgct
tctcaaccaggaggccttaaagtatcgaacagtcaatcaacaatggcaatgtcttcatta
atgccatcagcttcagtggaacccatatatgagcgggctgctgagaacaaaatgcctaat
agaagtgtctcggagccaatctttggtagtgctcctaagaaggttgattcatctaaggaa
acaaactcttctgatacgcaaggaaaggcatcagcatcaggtgggtcatctcgttttggt
cgttttggctcacagctattccaaaagactgtgggattggtcttgagatccagaccagac
cggcaggctaaattgggtgagaagaatagattctattatgatgaaaagcttaagagatgg
gttgaagaaggcgctgaacttcctccacctgaggaggctgcgctaccacctccaccaaca
actgcagcttttcagaatggaatgccagattacaacgtgaaagatgcaccaaaaaccgga
ggatttcccttggaattggggcttgaaaccaaaagcccaatctcttctgaacgaagttcg
gggatcccacctattccacctggttcaaaccagttctctgcacgtggacggatgggtgtt
cgctcaaggtatgttgacacattcaataagggtggtgggaccccatcaaatttgttccag
acaccttctattccagctgctaaacctgggggtggttccaatcctaaatttttcatccct
gctccagtagcttctgttgtggagacagttcagacacctggagaaagcatgcaagaggct
actctaaacaatgccaatccacctacttcatttaaagaggattctatctcttccacacaa
aaatcaacattgccatcaatgagtctgcagcggtttcctagcatggataatattgtacaa
aggaaaacagggccaatggcacatggaactagcttagttccccctccctcacggcgtaca
gcatcatggagtggaaaccttagtgatggatggaatccttcaatgatgaatgaagtaaaa
cctttaggagaagtcctcagtatatctccatctttgtacaggccaggtgaccctttatca
gtgcagtttccatcgagtcgtaatagttctagagatgatcttcatgaagttgaactttga
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