Quercus lobata (valley oak): 115986593
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Entry
115986593 CDS
T07350
Name
(RefSeq) ATP-dependent helicase BRM isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115986593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115986593
03036 Chromosome and associated proteins [BR:
qlo03036
]
115986593
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115986593
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
115986593
Chromatin remodeling factors
BAF complex
115986593
PBAF complex
115986593
GBAF(ncBAF) complex
115986593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
Bromodomain
AAA_14
HDA2-3
Motif
Other DBs
NCBI-GeneID:
115986593
NCBI-ProteinID:
XP_030965634
UniProt:
A0A7N2LGG1
LinkDB
All DBs
Position
4:53973761..53986869
Genome browser
AA seq
2266 aa
AA seq
DB search
MQSGGGGGGPGRVGPAGRAASTSSAASPSSSSSAVSTPHMGFDSMQQQQQQQQQQQQQQQ
QLGSRQSLQQQLHRKPEGNEAFLAYQASLQGVLGGNNFASSPGSMQLPPQSRKFIELAQQ
HSSPHEGQNTSQAIDQQMLSPVQQAYLQYAFQAQQKSALAMQSQHHAKMGMLGPPPGKDQ
DMRMANLKMQDLISMQGPNQAQASSSKNSSEHFGRGEKQMDQGQQPTSEQRSEPKPSTQL
TGHGQLVPGNMVRPLQAPQAQQSMQNMSNNQLMSAQLQAMHSWALERNIDLSLPANANLM
AQLIPLMQSRMVPQQKANESNMGAQSLPAPVSKQQVTSPSVASESSPHANSSSDISGQSG
SAKARQTVSASPFRSTSNAGMVNHASNNALQQFGTHGRENQVPSRQHAGIGNGMPSMHPP
QSSANTSQGVDHSLSVKNTLSSPEASQLQYLRQLNRSSPQAAAPTNDGGSGNNILSPGGS
SSQTPQQRFGFTKQQLHVLKAQILAFRRLKKGDPGLPQELLRAIAPPPLELQLQQQNPAA
GGNNQDKSAGNMAADYPRQIESNEKDSTGVASINGQTFPKEEAFVGDEKATISTAHLQGV
PAVMKEPTPVASAGKDEQQSSVFSVKSDQDVERGIHRNPVKSDFPVDKGKAIAPPAAASD
AVQVKKPVQASTAPQPKDAGSARKYHGPLFDFPFFTRKHDSFGSAMMVNNNNNLTLAYDV
KDLLFEEGMEVLTKKRSENLRKIGGLLAVNLERKRIRPDLVLRLQIEEKKLRLLDIQARL
RDEIDQQQQEIMAMPDRPYRKFVRLCERQRLELSRQVQASQKAMREKQLKSIFQWRKKLL
EAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQT
SIPGEAAERYAVLSSFLTQTEEYLHKLGSKITAAKNQQEVEEAANAAAAAARLQGLSEEE
VRAAAACAGEEVMIRNQFMEMNAPKDTSVSKYYTLAHAVNERVMRQPSMLRAGTLRDYQL
VGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWK
SELHTWLPSASCIFYVGGKDQRSKLFSQEVCAMKFNVLVTTYEFIMYDRAKLSKVDWKYI
IIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAF
HDWFSKPFQKEGPTQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSI
VLRCRMSAIQSAIYDWIKSTGTLRVDPEDEKRRAQKNPIYTAKVYRTLNNRCMELRKACN
HPLLNYPYFNDLSKDFLIRSCGKLWIMDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQW
RRLLYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDP
NPKNEEQAVARAHRIGQTREVKVIYMEAVVDKISSHQKEDELRSGGTVDMEDDLAGKDRY
MGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETLHDVP
SLQQVNRMIARSEEEVELFDQMDEELDWIEEMTRYDQVPKWLRTSTREVNTTVAAISKRP
SKHNLFAGNIVVESSEMGSDSSPKTERKRGRPKGKKHPNYKELDDENGEYSEASSDERNG
YSVHEEEGEIGEFEEDEFSGAVGAPPINKDPSEEEGAVCDGGYEYPRASESTKNNLTVEE
AGSSGSSSETRRVAQRRVSPSISSQKFGSLSALDARPGSQPKRLPDELEEGEIAVSGDSH
MDHQQSGSWNHDRDEGEDEQVLQPKIKRKRSLRVRPRHTMERPEEKSGSETQAFQRGDAS
LLPFQVDNRYQAQLKADSETKTYGEPNVFKHDQADSSSKSRRNLPSRRIASTSKVHASPK
SSRLNSVSTPAEDGEQSRENWDGKVMNSSGTSGYGTKMPDNVQRRCKSVITKLQRKIGKE
GPQIIPLLTDLWKRIENSGYTGGSGNNVLDLRKIDQRIDRLEYNGVMDLVFDVQFMLKSA
MHFYGFSHEVRSEARKVHDLFFDILKNTFPDSDFREARNALSFSGPFTTTAAPSPRQPAV
GPSKRHKLVNEVEPDPGPPQKPPQRGLVSSGDETRIRSHMSQKESRVGSGIGSSREQSQQ
EDSPLLTHPGELVICKKKRKDREKSAVKPRTGPAGPVSPPSMGRSMRSPGSGSVPKDTRQ
TQQSTHPQGWANQPAQPANGDGGSVGWANPVKRLRTDSGKRRPSHL
NT seq
6801 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctggtggaggagggggagggcccggccgggtgggaccggcggggcgggcggca
tccacatcatcggctgcgtcgccgtcctcttcgtcttcggccgtgtcgaccccgcacatg
gggtttgattcgatgcagcagcaacagcagcagcagcagcaacaacagcaacagcagcag
cagctggggtctaggcagtcattacaacaacagttgcatagaaaacctgaagggaatgaa
gcctttctagcatatcaagctagtctccaaggggttctaggagggaacaactttgcttca
tctcctggctctatgcaactgcctccacagtctaggaaattcattgaattggctcaacaa
cacagttccccccatgagggccagaatacaagtcaagctattgatcaacaaatgctaagt
ccagttcaacaagcttatcttcaatatgcctttcaagctcaacaaaaatcagctttggca
atgcaatcacagcatcatgctaaaatgggtatgttaggtccaccaccagggaaggatcag
gacatgcgaatggcaaatctgaaaatgcaggatctcatttccatgcaggggcctaatcag
gctcaggcatcatcatctaaaaactcatctgaacattttggtcgtggtgaaaagcagatg
gatcaagggcagcaacctacctctgaacagaggagtgagccaaagccttcaacccagctg
acaggccatggacaattagtacctggaaatatggtgaggcctttgcaagcaccacaagct
cagcagagcatgcaaaacatgtcaaacaaccagctcatgtctgcccagttgcaggcaatg
cattcgtgggcacttgagcgtaatattgatctctcactgccggcaaatgccaacttgatg
gcacagctcataccattgatgcagtctaggatggttccacaacaaaaggcaaatgaaagc
aatatgggtgcacagtcattacctgctccagtgtcaaagcagcaggtcacttctccatca
gttgcgagtgagagttctccccatgctaattcatcgagtgatatatctgggcagtctggc
tctgcaaaagcaaggcagactgtttcagccagcccttttcgctcgacttcaaacgctggc
atggttaaccatgctagcaacaatgcattgcagcagtttggtactcatggcagagagaat
caggtgccttctagacagcatgctgggattggtaatggaatgccatcaatgcatccccct
cagtcctctgccaacacaagccaaggtgtggatcattctctgagtgtgaaaaatacatta
agtagcccagaagcttcgcagttgcagtacctcaggcagttaaatcgatcttctccacaa
gcagcagctcctacaaatgatgggggctctggcaataacatcctttcaccaggtggatcg
tctagtcagacgcctcaacagcgctttgggttcaccaaacagcaattgcatgttcttaaa
gcacaaatactagcatttaggcggctgaagaaaggagatcctggtctgcctcaagaacta
cttcgagctattgctccaccacctctcgagttgcagctgcagcagcaaaatcctgctgca
ggaggaaataatcaggataaatcagctgggaacatggcagcagactatccaaggcaaata
gagtccaatgagaaggattcaactggtgtggcatcaattaatggacaaactttcccaaaa
gaggaagcttttgtgggagatgagaaagcaaccatcagcacagctcatttgcaaggtgtt
ccggctgtaatgaaggaacctacaccagtggcatctgctggaaaagatgagcagcaatcc
tctgtattttctgttaaatcagatcaggatgttgaacgtggtattcatagaaatcctgtt
aaaagtgatttcccagtggataagggaaaggctattgcaccaccggcagctgcatctgat
gcagtgcaagttaagaaacctgtacaagcaagcactgccccccagccaaaagacgctggc
tccgctagaaagtatcatgggcccctatttgatttcccctttttcactaggaaacatgac
tcttttgggtcggcaatgatggttaataacaataataatctaacattggcatatgatgtc
aaagatcttctttttgaggaaggcatggaagtgcttaccaagaaaaggtccgaaaattta
agaaagattggtggtttactggcagtgaacttagagaggaaaaggattcggccagatctt
gtcttgaggctgcaaattgaagagaaaaagcttcgacttttagatatacaggcacggtta
agggatgaaattgatcaacagcaacaagagataatggcaatgcctgacaggccatatagg
aaatttgttcggctgtgtgagcgtcagcgactggagcttagtagacaagtacaggcctct
cagaaagctatgagagagaagcaacttaaatccatatttcagtggcgtaagaagcttctt
gaggctcactgggccatccgtgatgcacgaactgcccgcaataggggggttgccaaatat
catgagaggatgttgagagaattttctaaaagaaaagatgatgacaggaataagaggatg
gaagcattgaaaaataatgacgttgaaaggtacagggagatgttgctagagcaacagaca
agcattccaggtgaagctgcagagagatatgctgttctttcatcattcttgactcagact
gaagagtatctacataaactgggaagtaaaataacagctgccaaaaaccaacaagaagtg
gaagaagcagcaaatgctgctgcagctgctgcacgattgcagggtctctcggaagaagaa
gttagggcagcagcggcttgtgctggggaggaagtaatgataagaaatcagttcatggaa
atgaatgcacctaaggatacatctgttagcaagtattatactcttgcacacgctgtgaat
gaaagggtcatgaggcaaccctcaatgttaagggctggaacgttgagggactatcaactt
gtcgggttgcaatggatgctctctttgtataacaataaattaaatggaatcttggcagat
gagatgggtcttgggaagactgtgcaggtaatggcattgattgcttacttgatggagttc
aaagggaactatggcccacatcttataatagttccaaatgctgttttggtaaattggaag
agtgagctccatacttggctgccatctgcgtcatgcattttttatgttggtgggaaggat
caacgatcaaaattattttctcaagaggtttgtgctatgaaatttaatgtccttgtgaca
acttatgagttcatcatgtatgatcgtgcaaaactttcaaaagttgattggaagtatatc
ataattgatgaagcacaaaggatgaaggacagggaatcagttttagcacgtgatcttgat
agatatcgctgccagaggcgcttgcttctcactgggacgccattacagaatgatttgaag
gaactctggtcacttttaaacctacttcttccagaagtatttgataatcggaaagcattt
cacgattggttctcaaagccctttcaaaaggaaggtcctacacagaatgctgaggatgat
tggcttgagactgaaaaaaaggtcatcatcatacaccgacttcatcaaattctggagcca
tttatgctcaggcgtcgtgttgaagatgttgaaggctcacttccacctaaggtttccata
gttttaagatgtaggatgtcagctattcagagtgccatttatgattggatcaaatccact
ggtactcttcgggttgatcctgaagatgaaaagcgcagggctcaaaagaacccaatttac
acggctaaagtgtatagaactttaaataacagatgtatggagcttcggaaagcctgcaat
catcctctgctcaattacccatatttcaatgacttatcgaaggactttctcataagatct
tgtgggaaattgtggatcatggatagaattcttatcaaacttcagagaactgggcatcga
gtacttctctttagtacaatgacaaaactccttgatatattggaggaatacttgcaatgg
cgacgacttctctacaggcgaatcgacggaacaactagtttagaagatcgtgaatcggct
attgtggattttaatagccctgattcggactgcttcattttcttgcttagtattcgtgca
gctggtcggggtcttaatcttcagtctgctgacacagttatcatttatgatcctgatcca
aaccctaaaaatgaggagcaggcagtggctagagcccaccgtattggacagacaagagaa
gtcaaagtcatttatatggaagcagttgttgataaaatctctagccatcagaaagaagat
gagctaagaagtggaggtacagttgatatggaggatgaccttgctggtaaggatcgttat
atgggatctattgagagcctgataaggaacaacattcaacaatataaaattgatatggct
gatgaggttattaatgctggacgctttgaccagagaacaacacatgaggagagacgcttg
actttggaaacattattgcatgatgaggagagatatcaagaaactttacatgatgttccc
tcactgcagcaggtcaatcgcatgattgctaggagcgaagaggaagttgagttatttgat
caaatggatgaggaactggattggattgaggagatgacaaggtatgaccaggtacctaag
tggcttcgaacaagtactagagaagtaaataccactgttgccgctatttccaaaagacca
tcaaagcacaatttatttgctggtaatattgttgtagaatctagtgaaatgggttctgat
tcttctcctaagactgagaggaaaaggggacgcccaaaagggaaaaagcatcctaactac
aaggaattagatgatgaaaatggggaatactctgaagcaagttctgatgagagaaatgga
tattctgttcatgaagaagagggagaaattggagagtttgaagaggatgaatttagtggt
gctgttggggcaccaccaatcaacaaagacccatcagaagaggagggtgcagtttgtgat
ggtggatatgagtatccccgggcttcagaaagtacaaaaaataatctcacagtagaagaa
gcaggttcctctggatcatcctcagaaactcgaagagtggcacaaaggagggtatcgcct
tccatttcttctcagaaatttgggtccctgtctgctttagatgctaggccaggttctcaa
ccaaaaaggctgccagatgaacttgaggaaggggaaattgcagtatctggagattctcac
atggaccaccaacaatctggaagttggaatcatgatcgtgatgaaggtgaagatgaacag
gttttgcaacccaaaataaagcgaaaacgtagtcttcgggttcgtccccgtcataccatg
gaaaggccggaggagaagtctggtagtgagacacaagctttccaacgaggagatgcgtct
ctgttgccattccaagtggacaataggtatcaagctcagttaaaggctgactctgaaaca
aaaacatatggagagcccaatgtctttaaacatgatcaagccgattcatcctcaaaaagt
aggcgaaatttgccatcaaggagaatagctagtacgtcaaaagtgcatgcttcaccaaaa
tctagcagattgaatagcgtgtctactccggcagaagatggtgaacagtcaagagaaaat
tgggatggtaaagttatgaattcaagtgggacatcaggttatggcactaagatgcctgac
aatgtccagagaaggtgcaagagtgtaatcactaagcttcaaaggaaaataggtaaggaa
ggtcctcaaattatacctctgctaacagatttgtggaagaggattgaaaactctgggtac
acgggtggatcaggaaataatgttttggatttacgaaagatcgatcagcgtatagacaga
ttagagtataatggagttatggaccttgtgtttgatgtgcagttcatgttgaaaagtgca
atgcatttttatgggttctcacatgaggtgagatctgaagcaaggaaagtgcatgatctc
ttttttgatatcttgaagaatacatttccggactcagattttcgagaagccagaaatgcg
ctctctttttctggcccatttactaccactgctgctccatccccaagacagccagctgtt
ggcccaagcaagagacacaagttggtaaatgaggtggaacctgatccaggccctccacag
aagccaccacagcgtggactcgtttccagtggtgacgagacaagaattagaagccatatg
tcccagaaggaatcaagggttgggagtggaattggcagtagccgagagcaatctcaacag
gaagattccccacttcttacacatccaggagagctggtaatatgcaagaagaagagaaaa
gacagggagaagtcggcggtgaagcctaggactggaccagccggcccagtttcaccgcct
agcatgggacgtagtatgagaagtcctggttcaggttcagtacccaaggacacaagacag
acccaacaaagcacccatccgcaaggatgggccaaccagcctgctcaaccggcaaatggg
gatggtgggtctgttggttgggcaaatcctgtaaagagattgaggacagattctggaaaa
aggaggccaagccatctatga
DBGET
integrated database retrieval system
