Quercus lobata (valley oak): 115986701
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Entry
115986701 CDS
T07350
Name
(RefSeq) flocculation protein FLO11-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115986701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115986701
03036 Chromosome and associated proteins [BR:
qlo03036
]
115986701
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115986701
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115986701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEARLI-4
DUF724
Ada3
Spectrin_Anc-1_2
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
115986701
NCBI-ProteinID:
XP_030965812
UniProt:
A0A7N2R2Z2
LinkDB
All DBs
Position
4:35012560..35022416
Genome browser
AA seq
745 aa
AA seq
DB search
MSGFPFGSSVSTTSSQSTPSPFSFSSAATASAFSFGSSASPFGSSTSPFGSSPSPFSFAS
SSSTTTTTAANPISSAPPASLGFGSSTPSFSFPFNSASTPPAATTTSSSFLTASTATTTT
SPLFGTTPSATTTPSAASPLFGSSTTAATTTSPLFLSTPSLSPFATSLSTTSSTSSPFLS
ASSNLFAGSGSSSSASTTAPSFSFAPNSTASSSGLSFSNASAFSKPTPSPSTATTTTPFS
FLTPSSAASVSTTSAAKPSSSAAPLFSTITTTTTTASTPAASTTTTTTTTSQPSFSVPSF
GFTPSSASTAPSISVPASSAAASSSSSTASSFTGFGVTSAASTTPSLGTTGFNFSKLSTP
ASPSQAQSTTTAPVFRCPFFSGESCVACSAKLFKNCVGDRGDGVEGKQLGDGMVKKPMLP
NAVTVEEAKEEVASRVEKDHDEIMEVVEMKMAALAMDSVPGNVVSFPTIASSAISSMSQI
AKATVVTPEILKAELSVIGSEGVMLLGKEVKGGHKDCPVKMEAKNDLDTSASKAFKVDEA
SDSGLGMQTSPLSSLCVEMDSHVCSSHKSPIIKSILYKYGDKPSPLSSLCVEVDKHVLSP
HNGPIIKSILYKYGDITMGSTFRSMDAKLAFLELMADAVYRLSNLTLDTVNSHEIQLIEA
KVADVLAAGFNVKWLKQRVDEVIASAKYQEYCMELDELDKQIEATKKSLVDMEQQRVVLA
REVIAIKAQNERNGILGHTLAEGLL
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtttcccattcggatcctccgtttccaccacctcctcacaatccacaccttca
cccttctccttctcctccgccgccaccgcctccgccttctcgttcggatcctccgcctcc
ccattcggatcctccacctccccattcggatcctccccttcccccttctccttcgcctcc
tcctcctccaccaccacaaccaccgccgcaaaccctatctcctccgccccacccgcctct
ctcggattcggatcctccaccccttccttctctttccccttcaattccgcctccactccc
cccgccgccaccaccacctcatcctcattcctaaccgcctcaactgccacaaccaccact
tcacctctcttcggaacgacgccgtccgcaaccacaactccttccgccgcttcacctctc
ttcggatcttcaaccaccgccgccaccaccacttcccccctgtttttatcaactccatct
ctatccccgttcgccacatcgctatccacaacgagttcaacctcatccccattcctctcc
gcctcttcaaatctcttcgccggttctggttcttcttcttcagcttcaacaaccgctcct
tcgttctcgttcgctccaaactcaaccgcatcttcctccggactctcattctcaaacgct
tcagctttttcaaaaccaactccatctccatcaacagcaacaacaacaacgcctttctca
ttcctaacaccttcctccgccgcctcggtttccaccacatccgcagcaaaacctagctcc
tccgcagcgccattgttttcaacgatcacgaccacgaccacgaccgcttcgactccggct
gcttctactactactactacaactacaacatcacagccttcgttttctgtgccttcgttt
ggttttactccatcttcggcttcaacagctccttcaatatctgtaccggccagctcggcg
gctgcttcttcttcgagctctactgcgagttcttttacaggttttggtgttaccagtgcc
gcgagcacgactccttcgttggggactactggttttaacttcagcaagctgtcgacgcct
gcttcgccctcgcaagctcaatccaccactactgcacctgttttcagatgcccttttttt
tcgggtgaaagttgtgttgcatgttctgctaagctattcaagaattgtgtgggtgataga
ggggatggggttgagggtaagcagctgggagatgggatggtgaagaagccaatgcttcca
aatgctgttactgtagaggaagccaaggaagaggtggcctcaagagtggagaaggatcat
gatgagataatggaggttgtggagatgaaaatggcagcattagctatggattctgttcca
ggcaatgtggtttcctttccaacaattgcatcttctgccatttcatcaatgtcacagatt
gcgaaggctactgtggtcaccccagaaattttaaaagcagaattgtctgttataggcagt
gaaggggtgatgttgctgggtaaggaggttaaaggaggccataaggattgtcctgtgaag
atggaggctaagaatgatttggatacttcagcttctaaggctttcaaggtagatgaagca
agtgatagtggacttgggatgcagacttctcctttatcatctctatgtgtagaaatggat
agccatgtctgctcttctcataaaagcccaatcatcaaaagtattttgtacaaatatggt
gacaaaccttcccctttatcatctctatgtgtagaagtggataagcatgtcctctctcct
cataacggcccaatcatcaaaagtattttgtacaaatatggtgacataaccatggggagc
acattcaggagtatggatgccaagttggcttttcttgaattgatggctgatgctgtgtat
cgactttccaaccttaccttggacacagttaattcacatgaaattcaactcatagaggca
aaggtagctgatgtgcttgctgctgggttcaacgtgaaatggttaaagcaaagggtggat
gaagttattgcctctgctaaataccaggaatattgtatggagttggatgagttggacaaa
caaatagaggctacaaagaaatctttggtggatatggagcagcaacgtgtggttttggca
agggaggttattgccatcaaagctcaaaatgaacgaaatggcattttggggcataccctt
gctgaagggctactgtga
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