Quercus lobata (valley oak): 115986816
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Entry
115986816 CDS
T07350
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qlo03000
]
115986816
Transcription factors [BR:
qlo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115986816
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
115986816
NCBI-ProteinID:
XP_030966006
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Position
4:80286202..80292859
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AA seq
589 aa
AA seq
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MAASSSSVPFFANIREEDQNQMKQQHSSTAPTSSTVQAAPPPQKKKRNQPGTPNPDAEVI
ALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPT
CVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDC
GTLFSRRDSFITHRAFCDALAQESARQPPNLGSTIGSHLYGNSNMGLGLSQVGPQISSMQ
DQNNQSNDMLRLGSGRPSQFDHLLPPGIGSSFRPPHPMHSSAMFMQDSSQNYHQEHQSQQ
GLMSEKPFHGLMSFSDLQNSTTNNPPPAGTNLFNLGFMSNTSSNSSSNANNNNTSLPSSA
MLMPNHFNNENSSGGGSEGSNLFSNNMMVDQITSGVPSLYTTSVQSNTAMPHMSATALLQ
RAAQMGSTSSNNNTSSSLLRSFGSSSSKSERQVVPGGLSSMFGENNENHFQDLMNSFTSG
NSSIFGSKFGPYDTNRTNLELMDQEPNNKPNQNLSGGGGGSGSDRLTRDFLGVGQIMRSM
SGVSQRDQQQRQQQQQQQQQQHGLHMSSLDSDRNTAPSSQSFGGGGNFQ
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcttcttcatcggtaccttttttcgcaaatattcgagaagaagatcaaaac
cagatgaagcaacagcattccagtactgcaccaacatcatctaccgttcaagctgcacca
ccacctcagaagaaaaagagaaatcaacctggaacaccaaatccagatgcggaggtgata
gcactatctcccaagaccctaatggcaacaaacaggttcatatgtgaggtatgcaacaaa
gggttccaaagggagcaaaacctacagcttcacagaagaggacacaacctgccttggaag
ctaaagcagaagactacaaaagaaccaaaacgcaaggtttatctgtgccccgagcccaca
tgtgttcaccatgacccttcaagggctctgggagacctcactgggattaaaaaacactac
tctcgtaagcacggtgagaagaaatggaagtgtgagaagtgttccaagaggtatgctgtg
cagtctgattggaaagcccattccaaaacctgtggcactagagaatacagatgtgactgt
ggcactctcttctctaggcgtgatagtttcatcactcatagggccttttgtgatgcattg
gctcaggaaagtgcaagacaacctcccaacttgggcagtacaattgggagtcacttatat
ggaaatagcaacatggggttgggattatctcaagtgggtcctcaaatttcctcaatgcaa
gaccaaaacaaccaatccaacgatatgctacgactcggcagtggccgtcccagccaattc
gatcatctccttccacccgggattggttcctctttccgaccaccacatccgatgcattct
tcggctatgttcatgcaagattcaagccaaaactatcatcaagaacaccaatctcaacaa
gggttaatgtcagagaaaccatttcatggactaatgtcattttctgatcttcaaaacagc
acaaccaataaccctcctccagctggaaccaatctcttcaaccttggcttcatgtccaat
acaagttctaatagcagtagcaatgccaacaacaacaacaccagtcttccatcttcagcc
atgctaatgcctaaccatttcaacaatgaaaatagcagtggtggaggcagtgaagggtct
aatctcttttccaataacatgatggttgatcaaatcacttctggtgtcccttctctctat
actacctcagttcaaagcaacactgctatgcctcatatgtcagcaactgcactgcttcaa
agggctgctcaaatgggttcaacttcaagcaataacaacactagttcctctctgctaaga
tcttttggaagctcttcctccaaatctgaaagacaagttgtaccaggtggcttaagcagc
atgtttggagagaataatgagaaccacttccaagacctaatgaactcctttactagtgga
aactcctccatttttggaagcaagtttggtccatatgatacaaataggaccaacttagaa
ctcatggatcaggaacccaataataagccaaatcaaaatctgagtggtggtggtggagga
tctgggtctgacaggttaacaagggactttcttggggttggacaaataatgagaagcatg
agcggagtttcacaaagagaccagcaacaacgtcaacagcagcagcagcagcagcaacag
caacatggccttcatatgagctccttggactcagacagaaatacggcgccgtcaagccaa
tcttttggaggtggagggaattttcagtga
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