KEGG   Quercus lobata (valley oak): 115986828
Entry
115986828         CDS       T07350                                 
Name
(RefSeq) protein ELC-like
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03250  Viral life cycle - HIV-1
qlo03272  Virion - Hepatitis viruses
qlo04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115986828
   03272 Virion - Hepatitis viruses
    115986828
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115986828
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:qlo04131]
    115986828
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:qlo04147]
    115986828
Membrane trafficking [BR:qlo04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    115986828
Exosome [BR:qlo04147]
 Exosomal proteins
  Proteins found in most exosomes
   115986828
SSDB
Motif
Pfam: UEV Vps23_core TF_AP-2 UQ_con Nsp1_C SWI-SNF_Ssr4_C
Other DBs
NCBI-GeneID: 115986828
NCBI-ProteinID: XP_030966021
UniProt: A0A7N2LE80
LinkDB
Position
4:22080078..22085067
AA seq 402 aa
METQQFLSSVLSQRGPSALPYSEDTKWLIRQHLVALTSAYPSLDPKTATFTHNDGRSVNL
LQAEGTIPVSFQSVTYNIPIIIWLMESYPRHAPCVYVNPTRDMIIKRPHPHVNPSGLVSI
PYLQNWIYPSSTLVELARNLSLHFGRDPPLYSQRRPNPNPSPNFNPYGPTHAPAAAAYTR
PAIPPPRSYPASPYGAAAAAAVAAQTEDPSEVFKRNAVNKLVEMVHGEVVSMRKTREAEM
EGMFNAQSVLRYREDQLRKAVKEMHDEKEGLEQQLQMVLMNADILESWLRENEAKVRSFG
EGVDVDDAFECMDALSKQMMDCTAADLAIEDAVYALDKAAQEGAVPFDLYLRNVRLLSRE
QFLHRATATKVRAAQMQTQVANMAARISHYGGDPDALPRVRA
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggagacccaacaattcctaagctccgtcctctcccaacgcgggccttccgccctccca
tactccgaagacaccaaatggctaatccgccagcacctcgttgctttaacctccgcatac
ccatctctagaccccaaaaccgccaccttcacccacaacgacggccgctccgtcaacctc
ctccaggccgaaggcaccatcccggtttccttccagtccgtcacctacaacatcccgatc
ataatctggctcatggagtcctacccccgccacgcgccctgcgtctacgtcaaccccacg
cgcgacatgatcatcaagcgccctcaccctcacgtcaacccttcgggcctcgtgtcaatc
ccttacctacagaattggatctacccgagctccaccctcgtcgaactcgcccggaatctc
agcctccacttcggccgcgatccgccgctctactcgcagcgccggccgaaccctaaccct
agccctaatttcaacccttatggtcccactcacgcgccggcggcggcggcttacacgcgc
cctgcgattcctccgccgcggtcctacccggcttccccttatggtgctgccgccgcggcg
gcggtggcggcgcagacggaggatccgtcggaggtgttcaagaggaatgcggtgaacaag
ctcgtcgagatggtgcacggcgaggtggtttcgatgaggaagacgcgtgaggcggagatg
gaagggatgttcaacgcgcagtcggtgctccggtaccgggaggatcagctgaggaaagcc
gtgaaggaaatgcacgacgagaaggaagggttggagcagcagttgcagatggttctgatg
aatgcggatattctcgaatcttggttgagagagaacgaagcgaaggtgcgtagcttcgga
gaaggtgtggacgtggacgacgcgttcgagtgtatggacgcgttgtcgaagcagatgatg
gattgcacggcggcggacttggcgatcgaggacgccgtgtacgcgctcgacaaggcggcg
caggagggcgcggtgccgttcgatctgtacttgaggaatgtgaggctcttgtcgcgcgag
cagttccttcatcgcgccaccgccacgaaagttagggctgcgcaaatgcagactcaggtg
gctaatatggctgctcggatatcgcactatggtggggatcctgatgcgttgccgcgtgtt
cgagcttga

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