Quercus lobata (valley oak): 115986875
Help
Entry
115986875 CDS
T07350
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qlo03009
]
115986875
Enzymes [BR:
qlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115986875
Ribosome biogenesis [BR:
qlo03009
]
Eukaryotic type
90S particles
Helicases
115986875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
115986875
NCBI-ProteinID:
XP_030966092
UniProt:
A0A7N2LI69
LinkDB
All DBs
Position
4:87254721..87265978
Genome browser
AA seq
492 aa
AA seq
DB search
MDQDALVDKDFPLFSKPTKRSKPTATTSTSTTAQNIGANTPHIEKSTNIDHDTTTTATFA
NLGLAEWAVQTCKELGMHKPTPVQTHCIPKILAGRDVLGLAQTGSGKTAAFALPILHRLA
EDPFGIFGLVVTPTRELAYQLAEQFRALGSCLHLRCTVVVGGMDMLNQAKTLMTRPHLVI
ATPGRIKVLLEENPDIPPLFSNARFLVLDEADRVLDVGFEEELRVVFKCLPKNRQTLLFS
ATMTSELEALLELSANKAYFYEAYEGFKTVATLKQQYIFIPNNVKDVYLMHILSKIEDMG
VRSAIIFVSTCRSCHLLSLLLEELDQEVAALHSFKSQSLRLAALHRFKSGQVPVLLATDV
ASRGLDIPTVDLVVNYDIPRYTRDYTHRVGRTARAGRGGLAVSFVTENDVALIHEIEADI
GKQLEAFECKENEVLSDITKVYKAKRVAVMKMMDDGFDEKEKERKKQKLKTLAEKGLLKK
RSKKRKRDKSTK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagatgctttagttgacaaggatttccccctattttcgaaacccaccaaacgc
tctaaaccaactgccacaaccagcaccagcaccaccgcccaaaacattggggcaaacacc
ccacatattgaaaaatcaacaaacattgaccatgatactaccaccaccgccacatttgcc
aaccttggcctcgctgagtgggcagtgcagacctgcaaagagctcggaatgcacaaaccc
acaccggtgcaaacccactgcataccaaaaatccttgcaggccgtgatgtactcggtctt
gcacagactggcagtggcaagactgctgcatttgcattgcctatcctgcaccgcctcgct
gaagatccctttggcatctttgggttggtggtgacaccaacaagggagcttgcataccag
ttggctgagcagtttagggcgcttgggtcatgcttgcatttgcggtgtactgtggttgtt
ggaggaatggacatgctgaaccaggcaaagactttgatgacaaggccacatttggtgatt
gcaactccagggaggatcaaggtcttgctggaagaaaatcctgatattcctcccttgttc
tccaatgctaggttcttagttttggatgaagcagatagagttctagatgttggatttgaa
gaggaattgagggtggtctttaagtgtttgccaaaaaatcggcaaactctattattttct
gcaacaatgacaagtgaactggaagcacttcttgagctttctgcaaataaggcatacttc
tacgaggcatacgaaggctttaagacagttgccactctaaaacagcagtatatttttatt
cctaacaatgtgaaggatgtttatctaatgcacattttgtctaaaatagaagatatgggt
gttcggtccgccatcatatttgtctccacctgcaggagctgtcaccttttgagtttatta
ctggaagagcttgatcaggaagtagcagcattacattcttttaaatctcagtctctaagg
cttgctgctctacatcgattcaaatctggacaagttcctgtattgctcgcaactgatgtt
gccagccgtggtttggatattcctacagttgatcttgttgtaaattacgatattcctagg
tacactagagattatacccatcgtgtggggcgtacggcaagagcaggcagaggagggctg
gctgtgagctttgttaccgagaatgatgttgctctcattcatgaaatagaagctgatatt
ggaaaacagttggaagcatttgaatgtaaagagaatgaggtgctttctgatattacaaag
gtttacaaggccaaacgcgtggcagtgatgaagatgatggatgacggctttgacgagaaa
gaaaaagaacgcaagaaacaaaaattgaaaactctagcagagaaaggattgttgaagaaa
aggagtaaaaagagaaaaagagataaatctactaaatag
DBGET
integrated database retrieval system
