Quercus lobata (valley oak): 115986937 Help Entry 115986937         CDS       T07350                                  Name (RefSeq) nuclear-pore anchor isoform X1   KO K09291   nucleoprotein TPR Organism qlo  Quercus lobata (valley oak) Pathway qlo03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:qlo00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     115986937  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:qlo03019]     115986937 Messenger RNA biogenesis [BR:qlo03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      115986937 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_MLP1_2 Motif Other DBs NCBI-GeneID:  115986937 NCBI-ProteinID:  XP_030966225 LinkDB All DBs Position 4:95859194..95901358 Genome browser AA seq 2084 aa AA seqDB search MPLFMTEEEFRRCVQANDAGSVAEKADSYIRELFKQVETVRAEADAGSITAEQTCSLLEQ KYISLSSEFAKLDSQNAQLQSSLDRHLADLALLQSNKHQQNLHSIGKDGEIERLAAEVSE LHKSKRQLIEFVEQKDLEIGEKNATIKSYLDKIVNSSNSASQREVRVSELESELARTQAA CTRLKEEKELVERHNVWLNDELTAKVDSVIELRRKSNDLEDDMSTKLADVERQLNECSSS LQWHKERVRELEMKLTSLQEELCSSKAAAAANEERLSAELSTVNKLVELYKESSEEWSGK AGDLEGVIKALETRLSQVENDYKERLEKEVGARNQFEKEAAELKEKLEKCEADIESSRKS NELNLVPLSNFSSETWMTSFETNDMVEDNRMIVPKIPAGVSGTALAASLLRDGWSLAKMY AKYQEAVDAQRHEQLGRKQSEAILQRVLYELEEKAEVILEERVEHERMAEAYSMINQRLQ NSLSEEANLEKTIQELKADLRRHERDYNLAQKEIFDLQKQVTVLLKECRDIQLRCGSTGL DGLDDGTTAVGGTNLESDTEKVISERLLTFKDINGLVEQNVQLRSLVRSLSDQAQRREME FKETFEMELKKHTDEAASKVAAVLQRAEDQGRMIESLHTSVAMYKRLYEEEHKLQSSLPH SAELGSDNRRTDLKLLLERSQEASKKAHEQAVERVKCLEEELSKSRSEIILLRSDRDKLA LESNFARERLESFMKEFEHQRNESNGILARNVEFSQLVVDYQRKLRESSESLHAAEERSR KLTMEVSILKQEKEMLSNAEKRACTEVCSLSERVHRLQASLDTIQSAEEVREEARVAERR KQEEYVKHVEREWAEAKRELQEERGNVRNLTVDREQTLKNAMRQVEEMGKELADALRAVV AAESRAAVAEAKLLDLERKSKSSDAMDVQVDGGNEPSSFSSNEVVVELHMAKEEIEKLKV EAQANKDHMQQYKSIAQVNEDALRQMECAHETFKIEADKLKKSLEAELLSLRERVSELEY ESGLKSEEVASVAAGNEETLASSLAEITILKEEISVKTSQVLEMEIQISAVKEDLEKEHQ RWRAAQANYERQVILQSETIQELTKTSQTLASLQQEASELRKLADAHRSENSELKAKWEV EKAMLEGSKNDAEKKYNEINEQNKILHSRLEALHIQLAERDRHSAGMPSGSTGTDTLGDS GLQNVINYLRRSKEIAETEISLLKQEKLRLQSQLESALKAAETSQASLQANRANSRALLF TEEEIKSLQLQVREMNLLRESNMQLREENKHNFEECQKLREITQKARTETENLESLLRER QIEVEACKKEIEMQKVERDNLETRFGELLERCKNIDVDDYNRMKDDVQQMQEKLKDKDAQ IVEIRKLLSERQDLISKLEQDLSKCKLDLNEREKRINDILLVEANSKQDVERQRKIVIQF KRKYEIALKEKEELSKENQTLSKQLEESKHGKRSIVDTTSEQAMKEEKDTKIQTLEKHME RLREELRKEKDRRLKIEKAIRDSYNNVDQDKTKFVNELEMHKQALKRISDELQKLKHAKD NLPEGTSVVQLLSGTVLDDLAAAYVSAVENFQKTAHLVFSELGARGSLVEPSSIVDTALT ATAGPAVSVQAPSTAFSVGPATSGLPAKATEESEKRFTLPKAIVETRKTGRKLNRPRLVR PEEPQGDIEMSEVDGARNVGKAAPSGDVEAQGNLTLISQPLVRKRIASASASDLHDESVI QGETGSDVAAPLLKKSKGLEPPHESSEGQFAVPVENLGTLQAPEETLNIGELAQASNEEA MEADKEEIETTGERAEDGREQPDGVSQDELLSEKNNVLEENLDRPGGSEMVSDEGPKDQA EPDNQQLMTESGSEREEGELEPDVTELEGGGDISNIIGSPEPGEGQPEPVASPLASPTRA DDESLAAVTLEVGEINSPEVLNDEKNDEGDVNEETAEGSDKSNDGNDQIPADTDQVMEAL SVPLESASASASSEIDVSKQGSPVSKQGSSTVTTEAEVVRQASPVSSTSTTINLSERARQ NAAKRLGVASSPVVRGGRGRAAPRARGARGRGRLGRGQSSGEQG NT seq 6255 nt NT seq  +upstreamnt  +downstreamnt atgcctctgtttatgacggaggaggagttccggcggtgcgttcaggcgaacgacgccggt tcggtggcggagaaggcggactcctacatacgagagctgttcaagcaggtggagacggtt agggccgaggccgacgccggctccatcaccgccgagcagacctgctctctcctcgagcag aagtacatctccctctcctccgaattcgccaagctcgactcccaaaacgcgcagcttcag tcctcccttgatcgccacctcgccgacctcgcccttctccaatccaacaagcaccagcag aatctccactccattggaaaggatggagagatagagaggttagcagcagaggtatcggag ttgcataagtcaaaaaggcagttgatagagtttgtggagcagaaggatttggagatcggt gagaagaatgccactatcaagagctatcttgataagattgtcaattcgtccaacagtgcc tcacaaagggaggtccgtgtcagtgaacttgagtcagagttggcacgtactcaggctgca tgtactcgtctcaaagaggagaaggaacttgtcgagaggcataatgtgtggcttaatgat gagttgacagccaaagttgacagtgttattgagctgcgtagaaaaagtaatgatcttgag gatgatatgtccactaagcttgcagatgttgagaggcaattaaatgaatgttctagctcg ttacaatggcacaaggaaagagttagggagttagagatgaagctaacatccttgcaagag gaattatgttcatctaaagctgctgctgcagccaatgaagagcgattatctgctgaactc tcaacagttaataagcttgttgaactatacaaagaaagttctgaggaatggtccggaaag gcgggagatcttgagggcgttatcaaagctctagagacacgtttaagtcaagttgaaaat gattataaagagaggcttgaaaaggaagtgggtgcaagaaaccaatttgaaaaggaggca gcagagctgaaagaaaaacttgagaagtgtgaagctgatattgaaagcagtagaaaatca aatgaactgaatcttgttccactcagcaatttcagttcagaaacatggatgacttcattt gaaacgaatgacatggttgaggataatcgcatgattgtccccaagattcctgcaggtgtt tcaggaacagccttggcagcttcgcttctgcgtgatggttggagtctggccaaaatgtat gcaaaatatcaagaggctgttgatgctcagagacatgagcagttgggaaggaagcaatct gaggccattttgcagcgggtcttatatgaattagaggagaaagcggaagtcattttggaa gaaagagtggaacacgagagaatggcagaggcatactctatgatcaaccaaagactacaa aattccctgtctgaagaggccaacttagagaaaaccatccaagaattgaaggctgacttg aggaggcatgaacgtgactataatcttgctcagaaagagatttttgacctccagaaacag gtgactgttcttcttaaggaatgtcgagatatacaacttcgttgtggatctacagggctt gatggtcttgatgatggtacaactgctgttggtgggacaaatttggagtctgatactgaa aaagtcatttcagaacgccttttgacatttaaggacataaatggattagttgagcagaat gtccaactaaggagtctcgttcgcagtctttctgatcaggctcaacgtagagagatggag ttcaaggaaacatttgaaatggagctcaaaaagcatactgatgaagctgcatctaaggtt gctgctgtgttacaaagagctgaagaccaagggcgcatgattgaatcccttcacacctct gttgcaatgtacaaaaggttatatgaagaggagcataaacttcaatcatctctgccccat tctgcagagcttggttcagacaataggaggactgatttaaagcttcttctcgaaagatct caggaagcttctaaaaaggcccatgagcaggctgtggaacgggtgaaatgtcttgaagag gaattgtcaaaatctaggagtgagattatattattacgatcggaccgtgacaagttggcc ctggaatctaattttgctagagagagacttgaaagctttatgaaggaatttgagcatcag agaaatgaatcgaatggcattttagctagaaatgtggagttttcgcaattagttgttgac taccaacgaaagctgcgtgaaagttctgaatctttgcatgctgctgaggaacgttctcgg aagctgactatggaggtatccattttaaagcaagaaaaggaaatgttatcaaatgctgag aagagagcttgcactgaagtttgtagtttgtcagagagggtgcatcgtctacaggctagc ttggacactattcaaagtgctgaggaagttcgtgaggaggcaagagttgctgagaggaga aaacaagaggagtatgttaagcacgttgagagggaatgggctgaggctaagagagagctg caagaagagcggggtaatgttcgaaacctcacagtagatcgtgagcagaccctaaaaaat gcaatgagacaagttgaagaaatgggaaaagagttggctgatgctttgcgtgctgtcgtg gctgctgaatccagagctgctgttgctgaggcgaaactgttggatctagagagaaaaagc aaatcttcagatgctatggatgttcaggtggatggtgggaatgaaccctcgtctttctcg agcaatgaggtggttgtagaattgcatatggcaaaggaagagattgaaaagttgaaagtg gaagcacaggctaacaaggatcacatgcaacagtataagagcattgctcaggtgaatgaa gatgcgttaagacagatggaatgtgcccacgaaaccttcaagattgaggctgacaaacta aagaaatcactagaagctgaacttctttcccttagagagagggtttctgaacttgaatat gagtctggtttgaagtcggaagaagtagcttctgtggctgcagggaatgaggagactctt gcttcttctttggctgaaattactatattaaaggaagaaatatcagttaaaacttcccaa gttttagaaatggaaattcagatttctgctgtgaaagaggacttggagaaagaacatcag cgatggcgtgctgctcaagccaattatgaaagacaggttatcctccagtctgagactatt caggagttgacaaaaacatcacaaaccttggcgtcactccaacaggaagcatctgagttg cgtaaattggcagatgcacacagaagtgaaaatagtgaattgaaagctaagtgggaagtg gagaaggcaatgcttgagggatcaaagaatgatgctgagaaaaagtacaatgaaataaat gaacagaacaaaatactacacagtcgacttgaggctttgcatattcaattggccgagagg gatcgtcattctgcgggaatgccttcaggaagcactggcacagatacacttggtgattct ggcttacagaacgttatcaattatcttcggcgatcaaaagaaattgcagaaacagagatt tctttgttaaaacaggaaaagctgcgactacaatcacaacttgagagtgctcttaaagct gcagagacttcccaagcctcacttcaagctaatcgtgcaaattcaagagcattgttgttc actgaggaagaaatcaaatctttgcagcttcaggtcagagaaatgaatttacttcgtgaa agcaacatgcagctcagagaagaaaacaagcacaattttgaggaatgccagaaattgcgt gaaatcactcaaaaagcaaggactgagactgagaatctagagagtctactgagagagaga caaattgaggtggaagcttgtaagaaagaaattgaaatgcaaaaggttgagagagataac ctggaaacaaggtttggtgagttacttgaaaggtgtaaaaatatagatgtggacgattat aaccgtatgaaggatgatgttcaacagatgcaggagaaactaaaagataaggatgctcag atagttgagatcagaaagcttctttccgaaaggcaggatctaatatcaaaattggagcaa gatctctctaaatgcaaattggatctgaatgagagagagaagaggataaatgatattttg ctagttgaggctaattcaaagcaagatgtggagaggcaaaggaagattgtgattcaattt aagaggaagtatgagattgcactaaaggaaaaggaagaactgagcaaagagaaccaaact ctttctaagcagttggaggagtccaaacatgggaaaaggtcaattgttgatacaactagt gaacaggctatgaaggaggagaaagacaccaagatacagactctagagaaacatatggaa aggctgagagaggaattaaggaaggagaaggacaggcgtttaaagattgagaaggcaata agggattcttataataacgttgaccaggataaaacaaagtttgtaaatgaactagagatg cataagcaggcgctgaagcggatttcagatgaacttcaaaagcttaagcatgcaaaagac aatttgccagagggtacctcagtagttcaacttctttctggaactgtccttgatgatctt gctgctgcttatgtgtcagctgtggaaaattttcaaaagacagctcatttagttttcagt gaacttggagcccgtggttctcttgttgaaccatcttcaattgtggacactgcattaact gctactgcaggtcctgcagtgtctgttcaagcccctagtactgcattctcagtgggacct gcaacaagtggcttgcctgctaaagcaactgaagagagtgagaagagatttactttgccc aaagctattgttgaaactcgaaaaacaggtaggaagttgaaccggccacgccttgtaaga cctgaagagccacagggtgatatagagatgtctgaggtggatggagctcgcaatgtgggc aaagctgcaccttctggtgacgttgaagctcagggaaatcttactttaatatctcaacca ttggtccgcaaacgtatagcatcagcatctgcttctgatttgcatgatgagtcagtcatc caaggagagactggctctgatgtagcagcacccttgctgaagaagtccaagggtttggaa cccccacatgagagttctgaaggacaatttgctgttcctgtggaaaatcttggaactcta caagcccctgaagaaactcttaatattggtgagttggcacaagcttcaaatgaggaagca atggaagctgataaggaagagattgagactactggggagagagctgaggatggaagagaa caaccagatggcgtgagtcaagatgaattgctgagtgagaagaacaatgttctagaagag aatttggataggcctggtggatcagagatggtatctgatgaagggccaaaggatcaagct gagccagataaccagcagttaatgacagaatctggaagtgagagagaggagggagagctt gagcctgatgttacagagcttgagggtggtggtgatatttccaacattattgggagcccg gaaccaggggaaggtcaacctgagcctgttgcaagccctctggcttcacccactagggct gatgatgaatctctagctgctgtcacactggaggttggtgagataaattctccagaggtt ctaaacgatgaaaagaatgatgaaggtgatgtaaatgaagagactgctgagggttctgat aagtcaaatgatggaaatgatcaaattccagcggacactgatcaggtcatggaagctctc tctgttccacttgagagcgcttcagccagcgcttcttcagaaattgatgtctcaaaacaa ggtagtcctgtctcaaaacaaggcagttcaactgtcaccacagaagcagaagtggtaaga caagcttcacctgtgagtagtacttcaactactataaacctttcagagcgagctaggcag aatgctgcaaaaagattaggtgtggcttcttctccagtggttagaggaggacgtggaaga gctgccccacgtgcccgaggtgcacgtgggcgcggtcgtcttggacgtggacaatcatcc ggtgaacaaggctaa

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