Quercus lobata (valley oak): 115987062
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Entry
115987062 CDS
T07350
Name
(RefSeq) protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115987062
03036 Chromosome and associated proteins [BR:
qlo03036
]
115987062
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115987062
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
115987062
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
115987062
microRNA pathway
RISC loading complex
115987062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
115987062
NCBI-ProteinID:
XP_030966369
UniProt:
A0A7N2LFM0
LinkDB
All DBs
Position
4:complement(51673021..51682518)
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AA seq
915 aa
AA seq
DB search
MASPEGNDKLDSLPPPPPVVPPNVIPIIAEPAKVSEPLKKTSTPKRLPMARRDYGNKGQR
LSLLTNHFKVDVPKIAGCFYHYSVALSYEDGHPVDAKGIGRKVIDKAKEVYDNEFRGKEF
AYDGENSLFTFGPLAQNKLELLVVLDTPSSNRASRRGSPGDDESDRKRSRRPFQSKTYKV
QISYAAKIPMQAILDALHGQESDRFQEAVRVLDIILRQNAAKQGCLLVRQSFFHGNERSF
INLDGGVLGCRGFHSSFRATEGGLSLNMDVSTTMIVQPGPVMDFLTSNQKSDRDRIDWIK
AKKTLKNLRIRVNNNEYKITGLSDQICKDQKFSLKQRKANGETEVVETTVYDYFVNHKQI
YLPNSAYYPCINVGKPKQPTYFPIELCTLVPLQRYTKALSGQQRASLVEKSRQKPKERMD
SLRDAFITSRYNDDQMLHSSRISISSEFTQVEGRVLPAPRLTTGNGEEFLPRNGRWNFNN
KKFVNPVKIENWAVVNFSARCDILRLVRDLRKIGEAKGLSISQPRGEFHESPQDRNASAP
VRVGRMIEMIGSKLKQKPEFFLCVLPERKNSEIYGPWKRRNLVLCGIVTQCIAPTRLNDQ
YITNVLLKINAKLGGLNSLLTIERSNSLPLISEIPTLILGMDVSHGSPGRSDMPSVAAVV
GSRDWPQISRYRASVCTQSPKVEMIDSLFKPVHKTNENGITRVVDEGIFRELLMDFYESS
NRKPQQIIIFRDGVSESQFNQVLNIELDQIIEACKLQEESWHPKFTVIVAQKNHHTRFFQ
TRGATENVPPGTVIDSKVCHPRNNDFYLCAHAGMIGTSRPTHYHLLYDEIGFSANDLQEL
VHSLSYVYQRSTSAISIVAPIMYAHLAASQVTQFIKFDDISDRSSSGGGVTSSGAVPVPE
LPKLNDAVKSSMFFC
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggcttctccagaaggcaatgataagctggattctctgccacctcctccacccgtggtc
ccgcccaatgttatccccatcatagcagaaccagcaaaggtctctgaaccattaaagaaa
acatcaactcccaaacgcttgcccatggccaggcgtgattacggaaataaagggcagagg
ctgtcacttctaactaaccatttcaaagttgacgtgcccaagattgctggttgcttctac
cattacagtgttgctctgtcttatgaagatggacatccggttgatgcaaaaggtattgga
agaaaagttatagacaaagctaaggaggtctacgataatgaatttcgaggtaaagaattt
gcttatgatggagagaatagcttgtttaccttcggtcctcttgcacaaaataaacttgaa
ctccttgtggtgttggacactccctcttcaaacagggccagcagaagaggtagccctgga
gatgatgaaagtgataggaagagatctaggcgcccatttcagtccaagacttataaggtg
cagataagttacgccgcaaaaataccaatgcaagcaattctggatgcattgcatggtcag
gaatcagatagatttcaagaagctgtgagagttcttgacatcatactaagacagaatgca
gctaagcagggttgcctcctagtccgacagtcattcttccacggcaatgaaagaagcttc
ataaatttggatggtggtgtccttggatgccgaggtttccattcgagtttcagagccaca
gaaggaggtctatcactgaatatggacgtatccactacaatgattgtacagcctgggcct
gtaatggatttcctcaccagcaaccaaaaatctgatcgtgatcgaattgattggataaag
gctaagaagacgctgaaaaatttgaggattagagttaataacaatgagtacaaaatcact
ggattgagtgatcaaatttgcaaagatcagaagttttcattaaagcaaagaaaggcaaat
ggtgaaaccgaagttgttgaaacaactgtgtatgactattttgttaatcataagcaaata
tacttacccaattcagcatattatccatgcatcaatgttgggaaaccaaagcaaccaacc
tactttcctattgagctttgcaccttggttccactgcaacgctataccaaggcattgtct
ggtcagcaaagagcttcactagtggagaaatcacggcaaaaaccaaaagaaaggatggat
tctttgagagatgcatttataactagtaggtataatgacgaccaaatgcttcattcttct
agaatttcaataagtagtgaatttacccaggttgaaggtcgtgtattgccagccccaagg
ctaacaaccggtaacggagaggagttcttgcctcgaaatgggaggtggaatttcaacaat
aagaaatttgtaaatccagtgaagattgagaattgggctgtggtgaacttctcggcacgc
tgtgatatactaaggctggtaagagaccttaggaagattggtgaagcgaaagggctttcc
attagtcaaccaaggggagaatttcatgagagtcctcaagatagaaatgcatctgcacca
gttagagtgggtagaatgatagagatgatcgggtccaaattaaagcaaaaaccagaattc
tttttgtgtgttcttccagagaggaagaattccgagatttatggtccatggaaaaggaga
aatcttgttctttgtggaattgttacacaatgcattgcacctacaagactgaacgatcag
tacataacaaatgtgctacttaaaattaatgccaagcttggaggactaaattcactgcta
acaattgagcgttctaattccttacctttgatttctgaaattcccaccctaatcctggga
atggatgtgtcacatggttctcctggccggtccgatatgccatctgttgctgcagttgtt
ggttccagagactggccacagatttctcgctatagagcttctgtctgtacccaatcacca
aaggttgaaatgattgattctctcttcaagcctgtgcataaaacaaatgaaaatggaatt
acaagggtggtggatgagggaattttcagggagctgttgatggacttctacgaaagttca
aataggaagcctcagcagataattattttcagggatggagtgagtgaatcacagtttaat
caagtgttgaacattgaattggatcagatcattgaggcctgcaagctccaagaggaatcg
tggcatccaaagttcacagtaattgttgcacaaaagaatcatcatacaaggttcttccag
actagaggagctactgaaaatgttccacctggaactgtcattgacagcaaagtttgtcac
ccaaggaacaatgatttttacttgtgtgctcatgctgggatgattgggacaagtcgacct
acacattaccatcttctatatgatgagattggtttttcagcgaatgatctgcaggagcta
gttcattcattatcttatgtgtaccaaaggagcacttcagccatatcaatagttgctcca
atcatgtacgcccacttggcggcctcccaggtgacacagtttattaagtttgacgacata
tcagaccgttcctcttcgggtggtggtgtcacatcttctggtgctgtcccagtgccagaa
ttgcccaaattgaatgatgcagttaaatcatccatgttcttttgttaa
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