KEGG   Quercus lobata (valley oak): 115987210
Entry
115987210         CDS       T07350                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RHA1B-like
  KO
K16281  RING-H2 zinc finger protein RHA1
Organism
qlo  Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:qlo04121]
    115987210
Ubiquitin system [BR:qlo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    115987210
SSDB
Motif
Pfam: zf-RING_2 zf-RING_5 zf-RING_11 zf-C3HC4 zf-rbx1 zf-C3HC4_2 zf-RING_UBOX zf-ANAPC11 zf-RING_16 zf-C3HC4_3 Zn-C2H2_12 Prok-RING_1 zf-RING_4 RINGv Prok-RING_4 zf-RING-like Rtf2 zf-RING_Vps41 zf-C3H2C3 Rad50_zn_hook zf-C3HC4_4 RH_dom SLX1_C zf_RING_Vps8 zf-Nse
Other DBs
NCBI-GeneID: 115987210
NCBI-ProteinID: XP_030966574
UniProt: A0A7N2LGH1
LinkDB
Position
4:complement(54225617..54226314)
AA seq 170 aa
MGFPVGYSEVFFPNLILQALSLLGFIRNLIFSLFNFLGLSDFIETDTIWVDDPTCTPEHK
PVSAMLIREFLPVMKVQDIVAGAGAGDPPESCAVCLYEFDGEDEIRWLRNCKHIFHRACL
DRWMDHDQKTCPLCRTQFVPEEKQDEFNQRLWAATGVSDFYAEYSEYNSD
NT seq 513 nt   +upstreamnt  +downstreamnt
atgggttttccagtcgggtactccgaggttttctttccaaacctcatcctccaagcactt
tcccttctgggtttcatcagaaacctcattttctcactctttaactttctgggtctctct
gatttcattgaaaccgacacaatttgggtagatgacccgacctgtacacccgaacacaaa
cccgtatccgctatgctgatccgggaattcttgccggtgatgaaggtgcaggacatcgtg
gccggtgccggcgccggagacccgccggaaagctgtgctgtctgcctgtatgagtttgat
ggagaggacgagatcaggtggttgaggaattgtaagcacattttccacagagcttgtttg
gaccgttggatggaccatgatcagaaaacgtgtcctctttgtaggacccagtttgtgcct
gaggagaagcaagatgagttcaatcaacgcctctgggctgctactggggtttctgatttt
tacgcagagtacagtgagtacaattcggattga

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