Quercus lobata (valley oak): 115987413
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Entry
115987413 CDS
T07350
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Module
qlo_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115987413
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115987413
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115987413
NCBI-ProteinID:
XP_030966812
UniProt:
A0A7N2LD97
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Position
4:8231388..8236306
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AA seq
449 aa
AA seq
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MSQQSQFLTLLIILASFSTCFSSYKEDPHATNGGPDPIAHTTSMGTINLGDKHEPWLVDF
MKSQTKRFGLTTRLSSASTSQKLVNVGDFGAKANGGDDTEAFRKAWKVACSSANSALVVP
ANKNYHLKPITFSGPCKPYFTMKIYGTIKASSHKSDYEKDTLHWLVFENLQDFNIEGGGT
INGNGRIWWESSCKINDKLPCKHAPTAVTFQDSKNVRVSSIRIKNAQQMHLTFQNCQNVE
ALNLVVIAPGNSPNTDGIHVTGTQNIQIQNCVIRTGDDCISIVSGSKNVQATDITCGPGH
GISIGSLGADNSEAEVSNVMVNRAKLTGTTNGMRIKTWQGGSGYAKNIIFQNVVMNNVSN
PIIIDQNYCDKKTACQQQPSAVKISNVAFKNIKGTSASEEAIKFDCSKSFPCQGVLLQDV
NLVRQGNGDVDATCLKVGLQKKGNVSPGC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaacaaagccaatttcttacacttctcataatcttagcctctttctcaacctgc
tttagcagttacaaagaggacccacatgctactaatggaggtcccgatcctatagcccac
actacatcaatgggcaccatcaacctgggtgataaacatgagccatggcttgtagacttc
atgaagtctcagaccaaaaggtttggtctcacaacaaggcttagcagcgcaagcacttca
cagaagctggttaatgtaggtgactttggagctaaagctaatggtggagatgatactgag
gcatttaggaaagcttggaaggtggcttgttcttctgcaaatagtgctcttgtggttcct
gcaaataagaactatcatcttaagccaattaccttctcaggtccttgcaaaccatatttt
accatgaagatctatggaacaattaaagcttcttctcacaaatcagattatgaaaaagat
acactacattggcttgtgtttgagaatcttcaagatttcaatattgaaggtggcggcacc
atcaatggcaatgggaggatatggtgggaaagctcatgcaagatcaacgataaacttccc
tgcaagcatgcaccaactgctgtgactttccaagatagcaagaatgtgagggtgtccagc
ataaggataaaaaatgcacagcaaatgcatcttacgtttcagaattgtcaaaatgtcgaa
gctttgaatcttgtggtgattgcaccaggcaatagccccaataccgatggaattcatgtc
acaggaacacaaaacattcaaatacagaactgtgtcatcaggacaggtgatgactgtatt
tcaattgtaagtgggtctaaaaatgttcaagccacggatattacctgtggaccaggacat
ggaatcagcattggtagcttaggagctgataattcagaagcagaagtttctaatgtcatg
gtgaatagagcaaaactcacaggaaccacaaatgggatgagaataaagacttggcaggga
ggctctgggtatgccaaaaacatcatatttcaaaatgtggttatgaacaatgtcagcaat
cctataatcatagaccaaaactattgtgataaaaaaacagcatgccaacaacagccctca
gctgtgaaaataagcaatgtggctttcaagaacatcaagggcactagtgcatcagaagag
gccataaaattcgattgcagcaagagctttccttgtcaaggggttttgttgcaagatgtt
aatctggtacgccaaggcaatggagatgtcgatgctacttgtctcaaagttggattgcaa
aaaaaggggaatgtctctccagggtgctga
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