Quercus lobata (valley oak): 115987461
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Entry
115987461 CDS
T07350
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1 isoform X1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115987461
Membrane trafficking [BR:
qlo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115987461
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
115987461
NCBI-ProteinID:
XP_030966863
LinkDB
All DBs
Position
4:84680579..84711352
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AA seq
1832 aa
AA seq
DB search
MLQLRHRRDSTPATTKWHNKFDENLEQWPHLNELVQCYTADWVKDDNKYGHYDTIGTPSF
SNQIYEGPDTDIETEMRLANARRTKAEDTTDDDLPSTSGRQFTETTSDVPKHFGPSPLPA
YEPAFDWENERSMIFGQRISEAPLSHGLKISVKVQSLSFQAGLLEPFYGTICLYNKERRE
KLSEDFHFRVLPTEMQDVSEKLSYEPRGIFYLDAPSASVCLLIQLERHATEEGGVTSSVY
SRKEPGHLSERERQKLQVWSQIMPFRESFAWAMVSLFDNSIGAATGGSASPSSPLAPSVS
GSSSHEGVFEPSTKITLDGKLGYSSGSSVIVEISNLSKVKESYTEDSLQDPKRKVHKPVK
GVLRLEIEKHQIGQADLDNISETGSVTNDSIDLGDRIADSTFRKFTNNGSDGPQSSNSKW
NLYDGKEISGNGSNLHGNADFSVDDFQAFDFRTTSRNEPFLQLFHCLYVYPLTVSLSRKR
NLFIRVELREDDADIRRQPLEAMYPREIGASLQKWVNTQVAVGARMPSYHDEVKIALPAI
WTPTHHLLFTFFHIDLQTKLEAPKPVVVGYASLPLSTHAQLRSEISLPIMKELIPHYLQD
TGRERLDYLEDGKNVFKLRLKLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELLEAIN
SLKNVDSTALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNIVTRVQQESADDAERNHF
LVNYVDYTFDDFGGRQAPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVK
SMALEKTRLFYHNLPTDEDIPPMQLKEGVFRCIMQLYDCLLTEVHERCKKGLSLAKRLNS
SLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQMVLHDCKLTFLQIICDHDLFVEMPGR
DPSDRNYLSSVLIQEIFLTWDHDDLSLRAKAARILVVLLCKHEFDARYQKPEDKLYIAQL
YFPLIGQILDEMPVFYNLNAVEKREVLIVILQIVRNLDDTSLVKAWQQSIARTRLFFKLL
EECLVLFEHRKPADGMLMGCSSRSPVGDGPASPKYSDRLSPAVNNYLSEASRQEVRPQGT
PENGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHPILRQKLELWEEN
LSASVNLQVLEITEKFSMMAASHSISTDYGKLDCITAILMSFFSRNQPLSFWKALFPVFN
NVFDLHGGTLMARENDRFLKQVTFHLLRLAVFRNESVRKRAVIGLQILVKSSFYCFMQTA
RLRVMLIITLSELMSDVQVTQMKPDGTLEESGEARRLRKSLEEMSDEAKSPNLSRECGLS
DSALVTIPERSEENRWSWSEVKYLSDSLLLALDGSLEHALLGSVMTMDRYAAAESFYKLA
MAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVARNDGVWSKDHVTA
LRKICPMVSNEITSEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELYHFCASILEL
VIPVYKSRRAYGQLAKCHTLLTTIYESILEQESSPIPFTDATYYRVGFYGDRFGKLDRKE
YVYREPRDVRLGDIMEKLSHIYESRMDGNHTLHIIPDSRQVKADELQPGVCYLQITAVDA
VMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRSVLQTEG
SFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRI
LQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIG
EEDQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atgctccagctccggcaccgccgcgactccactccggccaccaccaagtggcacaacaag
ttcgatgagaatttggagcagtggccacatctgaacgagctggtacaatgctatacggcg
gattgggttaaagacgacaacaagtacggccactacgacaccattggaacgccgtcgttt
tctaaccagatttatgaaggccccgatactgacattgagactgaaatgcgtcttgctaat
gcaaggcgaacaaaggcggaagatactactgatgatgaccttccgagtacctcaggaagg
caatttactgaaacaacctctgatgttccaaagcattttggcccgtctcccctccctgct
tatgaaccagcgtttgattgggaaaatgagaggtcgatgatatttggtcaaaggatttca
gaagctcctctttcacatggattgaagatctctgtcaaggttcagtccctatcatttcaa
gcggggttattagagccattctatggtacaatatgcttatataataaggagagaagagaa
aagttgtctgaggatttccattttcgtgtgttaccaactgaaatgcaggatgtaagtgaa
aaactttcttatgaaccacgaggaatcttctatttggatgctccatccgcatcagtttgt
cttttaatccagttagaaaggcatgccactgaagaaggcggagttacatcttctgtttat
tcacgtaaagaaccggggcatttgtctgagagagaaaggcagaaactgcaggtgtggtct
caaatcatgcctttcagagaatcctttgcctgggctatggtttcgttatttgataacagc
attggtgcagctactggagggtctgcttcccccagcagccctcttgctcctagtgtatct
ggctcaagttcccatgagggtgtgtttgagcccagtacaaagatcacattagatggaaag
ctgggttattcaagtggaagctctgtcattgttgaaatttcaaacttgagtaaagttaag
gaaagctatactgaggactcgcttcaggatccgaaacggaaggttcataaacctgtgaaa
ggtgttttgcgactggaaattgagaagcaccagattggccaagctgacttggacaatata
tcagaaactgggagtgtgaccaatgattccattgacctgggggaccgcattgctgattcc
acattcagaaagttcaccaataatggttctgatgggcctcagagtagtaactcaaagtgg
aatttatatgatgggaaagaaatttctggaaatggatcgaatttgcatggaaatgctgat
ttcagtgttgatgatttccaagctttcgacttccgcacaacgtcgagaaatgaacctttc
ctgcagctttttcactgtctgtatgtatatcccttgacggttagtttaagtcggaagaga
aatttgttcatacgggttgagctgagagaggatgatgctgatattcgtagacagccttta
gaggcaatgtatccgagggagataggtgcatcactccagaagtgggttaacacgcaagtt
gctgttggggctagaatgccttcttaccatgacgaggttaaaattgccctccctgctatc
tggacgccaacacatcaccttttattcacattcttccatattgatcttcagacaaaacta
gaagctccaaagccagtggttgttggatatgcatcacttccattatctacacatgctcag
ttgcgatctgaaatttctttgccgattatgaaggagttgattccacattatctccaggac
acgggaagggagaggctggattatttggaagatggaaaaaatgtctttaaactgcgttta
aaactttgttcatctttataccccatcaatgagcgcattagagacttttttcttgaatat
gacagacacacgctgcgaacaagcccaccttggggttctgaacttctggaggccattaat
agtttgaagaatgttgattccacagctttgcttcagtttcttcacccaattttgaatatg
cttctccatcttattggcaatggtggagaaaccctacaggttgcggccttcagagccatg
gttaatattgtaactcgggtgcaacaggagtcggctgatgatgctgaacgaaatcatttt
ctagttaactatgttgattatacttttgatgactttgggggtcgtcaagcaccagtatat
cctggtttgtcaactgtctggggtagcttggcccgaagtaaggctaaaggctaccgtgtt
ggaccagtctatgatgatgttttggctatggcttggtttttccttgagctaattgtcaag
tcaatggcattggagaagactcgtcttttctatcataaccttcccacagatgaagatatc
cctccaatgcaattgaaagaaggtgtctttagatgtataatgcagttgtatgattgcctt
ctaacagaagtgcatgagcgctgtaagaaggggttgagcttggcaaaacgtttgaatagc
agtttggccttcttttgttatgatcttttgtccatcattgaacctcgccaagtttttgaa
ttggtttccttgtacctggacaagttttctggggtgtgccaaatggttctgcatgactgc
aagcttacatttttgcagattatatgtgatcatgacctttttgtggaaatgcctgggaga
gacccttcagataggaactacctttcgtctgtcttgatacaggagattttccttacttgg
gatcatgacgatttatctctgcgggcaaaggcagctagaatattagtagtcctcttgtgc
aagcatgagtttgatgctcgataccaaaagcctgaagataagctatatattgcacagtta
tattttccacttattggacagatcctagatgaaatgcctgtcttttacaacctaaatgcc
gtggaaaagcgtgaagttttaattgttattttgcaaattgtgcgcaatcttgatgataca
tcacttgtaaaagcgtggcaacaaagcatcgctcggactagattatttttcaaactcttg
gaggaatgcttagttctttttgagcatagaaaacctgctgatggcatgctcatgggctgt
agttctcgcagcccagttggggatgggcctgcttcccccaagtactctgatagactttct
cctgcagttaacaattatctatctgaggcatcaagacaagaagtcagacctcagggaaca
cctgaaaatggttatttatggcagagagtgaattcccaattaagctcccctagtcagcca
tattccttgagagaagctctggctcaggcacagtcttctaggattggagcttctgcacaa
gcacttcgagaatctttgcacccgatattgagacaaaaattggagctttgggaagaaaac
ttgagtgcttctgtcaatctccaggttttggaaataacagagaaattttccatgatggct
gcctcccatagcatctctactgactatggaaaacttgattgtatcacagccatattaatg
agcttcttttcccgaaatcaacctctgtctttctggaaagctttgtttcctgtcttcaac
aatgtctttgatcttcatggaggaactctaatggcaagggaaaatgatcgtttcttaaag
caagtgactttccatctacttcgacttgcggttttccgaaatgaaagcgtcaggaaaagg
gctgttattgggctccagatacttgtgaagagttcgttctattgcttcatgcagacagca
aggttaagggtcatgctgattatcacattatcggagctgatgtctgatgtgcaagtgact
cagatgaagcctgacggaacgctagaggaaagtggtgaggcacgacggcttagaaagtct
ttggaggaaatgtcagatgaagctaaaagccccaacctatcgagggagtgtggactttct
gatagtgctctggtaacaattccagaaagatcggaagagaacaggtggtcctggtcagag
gtgaaatatctctctgatagtcttcttcttgcccttgatggaagcttggagcatgcacta
ttgggatctgtgatgactatggatagatatgcagctgctgaaagtttctacaaacttgca
atggcatttgcgcccgtcccagatcttcacataatgtggttgctacatttatgtgatgca
catcaggaaatgcagtcttgggctgaagctgcccagtgtgctgtggctgttgctggtgtt
gtgatgcaggcccttgtggctcgaaatgatggtgtttggagcaaggatcatgtaactgct
cttcgtaaaatttgcccaatggtgagcaatgagatcacatcagaggcttctgctgctgag
gtagagggatatggtgcttcaaagctcacagttgactctgcagtgaagtaccttcagctt
gctaataagcttttctctcaagctgagctctatcacttctgtgccagcattcttgagctt
gtaattccagtttataaaagcaggagggcatatgggcagctggctaaatgtcacacatta
ctcactactatctatgaatcaattcttgagcaggaatcaagcccaattccattcactgat
gccacatactatcgggtgggattctatggtgatagatttgggaagcttgatagaaaggag
tatgtataccgggagccccgtgacgttcggctaggtgacataatggagaaacttagtcat
atatatgagtctaggatggacggcaatcacactttacacattattccagattcaagacaa
gtgaaggcagacgaattacagcctggagtttgctacctgcagataactgctgttgatgca
gtaatggaggatgaagatttgggaagtagaagggaaaggatcttttcactttccactgga
agtgtccgtgcacgtgtgtttgaccgctttttgtttgataccccatttacgaaaaatggc
aagacccagggtggattggaagaccaatggaagaggcgaagtgtgcttcagactgagggc
tccttccctgcccttgtgaataggctcttggtaattaaatctgaatctcttgagttctcc
ccagtagaaaatgcaattggaatgattgaaactcggacagctgcactacgaaatgagctt
gaagagcctcgaagctctgaaggcgatcaactccctcgtctccagagtctacagagaatt
cttcaaggcagtgttgctgttcaagtgaacagtggagtcctaagtgtgtgtacggccttc
ctgtctggtgagcctgcaacgaggctgcgttcacaggaattgcagcaactcattgctgca
ctccttgaattcatggctgtttgcaagcgggccattcgggtacacttcagattgatcgga
gaagaagaccaagaattccacacacagcttgtgaatggatttcagtccctcactgcagag
ttatctcattacatccctgccattctctcagagctttga
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