Quercus lobata (valley oak): 115987580
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Entry
115987580 CDS
T07350
Name
(RefSeq) exopolygalacturonase-like isoform X1
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Module
qlo_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115987580
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
115987580
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GFIT
Motif
Pfam:
Glyco_hydro_28
DUF4135
Motif
Other DBs
NCBI-GeneID:
115987580
NCBI-ProteinID:
XP_030967020
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Position
4:93669536..93671966
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AA seq
392 aa
AA seq
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MGKNFSIATVSLLLLLTSTNAGQVFDVKSYGAQTNGDITQALTQAWKAACAVAGSKVVIS
TGTYKLGLVTLLGPCKGSIEFNLQGTLQAPSDIESFKGKDGWVVFERIDNLTVSGGGVFD
GQGQLAWQKNNCAKKYNCDILPINIRFNFITNSIVQDITSKDSKFFHINLLECKNLQFQH
VTITAPGDSPNTDGIHMGRSSQINITNANIGTCDDCISIGDGTQDITIKQLTCGPGHGIS
IGSLGRYQNEQPVSGIRVIGATLSNTNNGVRIKTWPASPSGTASDIHFENVIMDNVGNPV
LIDQNYCPNNQCSNESPSNVKINNVSFKNITGTSSTLEAVKFVCSKSVPCQQVVVADIDL
AYKGSGSATSTCVNVRPAVSGKQNPSACTKKI
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaattttagcattgcaacagtttccttgctattgctgttgacatccaccaat
gctgggcaggtctttgacgttaaatcatatggagcacaaactaatggcgacatcactcag
gctttgacacaagcttggaaagctgcatgtgcagtggcaggaagtaaagttgtgatttca
acagggacttacaaactaggtttagtgactttgttgggtccatgcaaaggttctattgag
tttaaccttcagggcaccctacaagccccatcagacattgaatccttcaaagggaaagat
ggttgggtcgtttttgaaaggattgacaatcttactgtgtcaggcggcggagtttttgat
ggccaaggacaactggcatggcaaaaaaataattgtgcaaaaaagtacaattgcgacata
cttcctattaatataaggttcaacttcatcactaattcaatagtccaagacattacatcg
aaggacagcaaatttttccatatcaaccttttggaatgcaagaacttgcaattccaacat
gttaccataactgcacctggagatagccccaacactgatggaattcacatgggacggtca
tctcagatcaacattaccaatgccaatattggaacatgtgatgattgcatctccattggt
gatggaacccaagatattactattaagcaactaacttgtggacctggccatggtattagc
attggaagtcttggaaggtaccaaaacgaacaacctgtttcaggaatcagagttattggt
gccactcttagcaatacaaataatggtgttagaatcaaaacatggcctgcttccccttct
gggactgcttctgatatacatttcgagaatgttatcatggacaatgttggcaatcctgtc
ctcattgatcaaaactactgcccaaacaatcaatgctcaaatgagtctccctctaatgtt
aagatcaacaatgttagcttcaagaacattacaggaacttcttcaacattggaagctgtg
aagtttgtttgcagtaagagtgtaccatgccaacaggtggtggttgctgacattgatctc
gcatacaagggaagtggatctgctacttccacttgtgttaacgttcgacctgcagtttca
ggcaagcagaacccttctgcttgtaccaaaaaaatttaa
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