Quercus lobata (valley oak): 115987809
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Entry
115987809 CDS
T07350
Name
(RefSeq) translation initiation factor IF-2, chloroplastic
KO
K02519
translation initiation factor IF-2
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
qlo03012
]
115987809
03029 Mitochondrial biogenesis [BR:
qlo03029
]
115987809
Translation factors [BR:
qlo03012
]
Eukaryotic type
Initiation factors
MTIFs
115987809
Prokaryotic type
115987809
Mitochondrial biogenesis [BR:
qlo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
115987809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
Ras
GTP_EFTU_D2
IF2_N
RsgA_GTPase
DUF6115
Roc
Arf
Ku
Motif
Other DBs
NCBI-GeneID:
115987809
NCBI-ProteinID:
XP_030967280
LinkDB
All DBs
Position
4:73101860..73112894
Genome browser
AA seq
1007 aa
AA seq
DB search
MLIIVGSMQGTMVSLASTASFGSLASERSHYSLVRRGCLSKGNWVKKKRWHCVSLSVCKY
SATAATDLVSEQSNTYRGGKSDDSDVGFLRKPTPKPVLTSSGSTWEPSRINGVSGDGDEK
LGVVEERNKVIESLGEVLEKAEKLETSRVSKPGSRSESRVVNKSIPSNTNSASTGATQNS
KTLKSVWRKGDNVATVQKEVKGKNGNTNKTIVKEETKKEARGKVESQAPPSPRPPQPPLR
PQPKLQAKPSVAPKPVIKKPVVLKDVGAVPKSSVIVETDSGLKTTERKPILIDKFASKKP
AVDPLIAQAVLAPAKPGKGPPPGKFKDDYRKKNAPAGGSRRRMFKDVDTDEDTSELNVSI
PGAARKGRKWTKASRKAAKLQAAKDAAPVKVEILEVAEEGMLIEELAYNLTIGEGEILGY
LYSKGIKPDGVQKLDKDIVKMICREHEVEVLDVDSIKVEEMARKKEIFDEEDLDKLQDRP
PVITIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYEVLVPIDGKVQPCVFLDTPG
HEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINKIDKDGANP
ERVMQELSTIGLMPEDWGGDTPMVQVSALKGENIDDLMETVMLVAELQELKANPDRSGKG
TVIEAGLHKSKGPLATFIVQNGTLKTGDIVVCGEAFGKVRALFDDGGNRVKEAGPSRPVQ
VIGLNNVPIAGDEFEVVGSLDIARERAESRAEALRDERISAKAGDGKITLSSLASAVSAG
KQSGLDLHQLNIIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQTTGDVSNSDVDLAFAS
NAIILGFNTKASGSVKSYAENKGVEIRLYRVIYELIDDVRNAMEGLLEPVEEQVTIGSVE
VRAVFSSGSGRVAGCMVVDGKVVNGCGIRVIRKGKVVHVGVLDSLRRVKEIVKEVNAGLE
CGIGMEDYNDWEVGDVLEAFSSIEKKRTLEEASASMTAAFEGVGMEE
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgttaataatagtaggaagtatgcaaggaacaatggtttctctggcttctacggccagt
tttggaagtttggcttctgaaaggtcacactactcattggtgaggagaggttgtttgtca
aaagggaactgggttaagaagaagaggtggcattgtgtgtcattatctgtgtgtaaatat
tctgccacagcagctactgacttggtttctgaacaaagtaacacctatagaggaggtaaa
agtgatgatagtgatgttggttttctacgtaagccgactcctaagccagttttgacgtcg
tcggggtctacttgggaaccatcaagaatcaatggggtttctggtgatggtgatgaaaag
ttgggggttgttgaggagaggaataaggtgatcgaatcacttggagaggtattggagaag
gcagagaagttagaaacttcgagggtgagtaagccggggagtaggagtgagagtagggtt
gtaaataaatccataccatctaacacaaatagtgcatcgacgggagcaactcagaattct
aaaactttgaagagtgtgtggaggaaaggggacaatgtcgctactgtacaaaaggaggta
aagggtaagaatggtaataccaataagacaattgtgaaagaggagactaaaaaggaggca
cggggaaaggtagagtctcaagcccctccttctccaaggccccctcagccacctttgaga
ccacaaccaaaattacaagcaaagccttctgtagctcctaagcctgtaataaagaaacct
gttgttttgaaggatgttggggcagttccaaagtcgtcggttattgttgaaactgactct
ggcttgaaaactacagaacgcaagccaattttgattgacaaatttgcttccaagaaacca
gcggttgatcctctgattgctcaagctgttttagccccagcaaaaccaggaaaaggcccc
ccacccggaaagttcaaagatgactatcgtaagaaaaatgctccagctggtggatcacgg
agacgaatgtttaaagatgttgacacagatgaggacacttcagaacttaatgtctctatc
cctggtgctgcaaggaagggtaggaaatggactaaagcaagtaggaaggcggccaaactt
caggctgccaaagatgcagctcctgtcaaagtagaaattcttgaggttgctgaagaaggt
atgttgatagaggagttagcctacaacttgactattggtgaaggtgaaattctcgggtat
ttatactcaaaagggattaagcctgatggggtgcaaaaactagacaaagatattgtgaaa
atgatttgtagagagcatgaagtggaagtcctagatgttgactccatcaaagtggaagaa
atggcaagaaagaaggaaatttttgatgaagaagacctggacaaactacaagaccggcct
cctgtcattactataatgggtcacgtggatcatgggaagacaacccttttggattatatt
cgaaagagcaaggtagctgcctcagaagcaggtgggattacacaaggaattggtgcatat
gaggtgttagttcctatagatggcaaggtgcagccatgtgttttccttgacactcctgga
catgaggcatttggagcaatgagggctcgtggagcaagggtgacagacattgctattatt
gtagtggctgctgatgatggaatccgtcctcaaacaaatgaggccatagctcatgcaaaa
gccgctggagtacccatagttattgctataaataagatagataaagatggagctaatcca
gaacgagtaatgcaagagctttctacaattggcctaatgcctgaagactggggtggtgat
acaccaatggttcaggttagtgctcttaaaggggagaatattgatgatcttatggaaacg
gtgatgcttgttgcagagttacaagagttgaaggctaatcctgatagaagtggaaagggc
acagtcattgaggcaggtcttcataaatctaaaggaccactagctacatttattgtgcag
aatgggactcttaaaacaggggatatagtagtttgtggagaagcctttggaaaggtgcgg
gctttatttgatgatggtggaaatcgtgtgaaggaagctggaccctctagacctgtgcag
gtgatcgggttaaataatgttccaattgctggtgatgaatttgaggttgttggctccctt
gatattgcacgtgaaagggctgagtcacgtgctgaggcattaagagatgaacgtatatca
gctaaggctggagatgggaagattactctttcttccttggcttctgctgtttcagctgga
aagcagtctggattagacttgcaccagctgaatatcatcatgaaggttgatgttcaggga
tccattgaagctgtcagacaagctctacaggtgctgccacaagataatgtcactttgaaa
tttctcttgcaaacaacaggagatgtaagcaacagtgatgttgatcttgcatttgccagc
aacgccattatattgggatttaataccaaagcttcgggatctgtgaaaagctatgctgaa
aataaaggcgttgagattcgactgtatagagttatctatgaactaattgatgatgtgcgg
aatgcaatggaaggactcctagaacctgttgaggaacaagtaacaattggctcagtggaa
gtccgggctgtttttagcagtggcagtggtcgcgttgctggctgcatggtagtagatgga
aaagtggtgaatggttgtggcattcgggtgattcgaaagggcaaagttgttcatgttggt
gttcttgattctctgagacgggttaaggaaattgtgaaagaggtaaatgctggactagaa
tgtggaattgggatggaagattataatgattgggaggtgggagatgttctcgaggccttc
agttcaattgagaagaagcggacgctagaagaggcatcagcttccatgacagctgcattt
gaaggagtaggaatggaagaatag
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