Quercus lobata (valley oak): 115988368
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Entry
115988368 CDS
T07350
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115988368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115988368
03110 Chaperones and folding catalysts [BR:
qlo03110
]
115988368
03029 Mitochondrial biogenesis [BR:
qlo03029
]
115988368
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qlo04147
]
115988368
Enzymes [BR:
qlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
115988368
Messenger RNA biogenesis [BR:
qlo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
115988368
Chaperones and folding catalysts [BR:
qlo03110
]
Heat shock proteins
HSP60 / Chaperonin
115988368
Mitochondrial biogenesis [BR:
qlo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
115988368
Exosome [BR:
qlo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115988368
Exosomal proteins of other body fluids (saliva and urine)
115988368
Exosomal proteins of breast cancer cells
115988368
Exosomal proteins of colorectal cancer cells
115988368
Exosomal proteins of bladder cancer cells
115988368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF763
Motif
Other DBs
NCBI-GeneID:
115988368
NCBI-ProteinID:
XP_030967766
UniProt:
A0A7N2LN25
LinkDB
All DBs
Position
5:complement(12448479..12457030)
Genome browser
AA seq
574 aa
AA seq
DB search
MHRIVSKLASSITSSTSRKVVCSRVVCNRNYGAKAINFGVGARAAMLQGVSEVAEAVKVT
MGPKGRNVIIERSHKDPQVTKDGVTVAKSISFKEKAKNVGADLVKQVAIATNTAAGDGTT
CATVLTQAILMEGCKSVAAGVNVMDLRSGINMAVDAVLSDLKSKALMISTSEEIKQVATI
SANGESEIGDLIARAMEKVGKEGVITVADGNTMDNELEVVEGMKLARGYISPYFVTDHKT
QKCELENPLILIYDKKISDMNSLVRILELAVQKKRALLVVAEDVESDALSMLVLNKHHAG
LKVCAIKAPGFGENRRANLDDLAILTGGEVITEDRGLTLDKVQFEMLGTAKKVSVSLDDT
IILHGGGDKKLIEERCAELRTAMEKSDAVFDKEKAQERLSKLSGGVAVFKVGGSSEAEVE
ERKDRVTDALNATRAAVEEGIVPGGGVALLYAAKGLGSLPTVNEDQKRGVKIIQNALKAP
AFTIASNAGFDGALVIGKLLEQDNHNLGFDAAKGVYVDMVEEKIIDPLKVVRTALIDAAS
ISLLLTTSEATVFDHPNEKNKSPSRMPNMDQMSY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgaatagtttcaaaattagcttcatcgatcacttcatctacttcaagaaaagtt
gtgtgtagcagagttgtctgcaatagaaattatggtgctaaggctattaatttcggggtc
ggggctcgggcggccatgctgcaaggcgtttctgaggttgcagaagctgtaaaagtcaca
atgggaccaaagggccgcaatgtgataattgagcgaagtcataaggatcctcaagtcaca
aaggatggtgttactgttgccaaaagtatcagcttcaaggaaaaagccaaaaatgttggt
gcagatcttgtaaagcaggttgcaattgctactaatactgctgctggagatggtactact
tgtgcaactgtcctaactcaggcaatactcatggaagggtgcaagtcagtagctgccggt
gtgaatgtgatggatttgcggagtggtattaatatggcagtcgatgctgttttatctgat
ctgaaaagcaaagcattgatgataagcacatcagaagaaattaaacaggttgcaactatt
tcggcaaatggtgaaagtgagattggagatcttatagctagagcaatggagaaagttgga
aaggaaggagtcattactgttgctgatgggaatacaatggataatgagttagaagtggtg
gagggaatgaagctggccagaggctacatatctccttattttgttactgatcataagacc
cagaaatgtgaactagagaaccccctgatcctcatttatgacaagaaaatttcagacatg
aattcacttgttagaatattggagctagcagtacagaaaaaaagagcactacttgtggtg
gctgaggatgttgaaagtgatgcactttctatgcttgtactcaataagcatcatgctggg
cttaaggtttgtgcgatcaaagctcctggttttggggaaaatagaagagcaaacttagat
gatcttgccattctcaccgggggagaggttatcactgaagaccgtggtttaacccttgac
aaagtgcaatttgaaatgcttggaactgcaaaaaaggtgtctgtctctcttgatgacaca
ataattctacatgggggtggggataagaagctgattgaagaaagatgtgcagagctgagg
acagctatggagaagagtgatgccgtgtttgacaaggagaaggcacaggaaaggctatca
aagctgtctggtggtgtggctgttttcaaggttggagggtctagtgaggcagaagttgag
gaaaggaaggatagggtcacggatgctttaaatgctacaagagcggctgtggaagagggt
attgtgccagggggtggtgttgctcttttgtatgctgcaaaaggtttgggaagccttcca
acggtaaatgaagaccagaaaagaggcgtaaagataatccagaatgctctaaaggcacct
gcattcacaatagcctcaaatgctggttttgatggtgcgctggttattggcaaattgttg
gaacaagataatcataatttgggttttgatgctgctaaaggtgtatatgttgacatggtg
gaggagaaaatcatagatcctctcaaagtggttagaacggctttaatcgatgctgccagt
atctcattgctactgacaacaagtgaggcaactgtatttgatcatccaaatgagaagaac
aaatctccgagccgcatgccaaatatggatcagatgtcctattag
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