Quercus lobata (valley oak): 115988400
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Entry
115988400 CDS
T07350
Name
(RefSeq) protein PELOTA 1-like isoform X1
KO
K06965
protein pelota
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115988400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115988400
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115988400
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_2
eRF1_3
Motif
Other DBs
NCBI-GeneID:
115988400
NCBI-ProteinID:
XP_030967806
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Position
5:complement(31780351..31801566)
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AA seq
379 aa
AA seq
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MKIVRRDLVPHGPGSVKMVPVDADDLWFVYNLISPGDSVMAVTVRKVLRQAATGGRDAER
MKLKLEIKVEEVADYDSVGSVLRIRGKNVLENEHVKIGAFHTLELELHRPFVLRKDVWDS
LALDALHQASDPSASADLAVVLMQEGLAHVLLVGKSVTITRSRIETSIPRKHGPAIAGYE
STLNKFFENVLQAFLKHVDFDVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR
IVLVHTTSGYKHSLREVLDAPNVMNMIKDTKAAQEIRALKDFFDMLSNDPSRACYGPKHV
EVAHERLAIQTLLLTDELFRNSDVATRKKYANLVDSVKDSGGTVHIFSSLHVSGEQLATI
TGIAAILRFPLPDLEDIEM
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgttcgcagagacctagttcctcacggtcctggtagcgttaagatggtacca
gtggatgccgatgatttatggtttgtttataatctcatatcccctggagattctgtcatg
gctgtcactgtcaggaaagttcttagacaagcggctactggaggaagagatgctgaacgt
atgaaattgaagttggaaataaaagttgaggaggttgcagattatgactcagtagggtct
gttttgcgcatacgtgggaaaaacgttctagagaatgagcatgtaaagattggggcattc
catactttagaacttgagctgcatcgaccttttgtgttacgaaaggatgtttgggactca
ttggcattagatgcacttcatcaggcctctgacccttctgcaagtgctgatttagctgtg
gttttaatgcaagaaggattagcacatgtcttacttgttggtaaaagtgtcacaattact
cgttcacggatagaaacttcaattcctcggaaacatggacctgctattgctggttatgag
tcgactctgaataagttctttgagaatgtgttacaggctttcttgaagcatgttgatttt
gatgttgtccgctgtgctgtgattgcaagtcctggtttcacaaaggatcagtttcatcgt
cacttattgttggaggcagaaagaagacagctgagacctattatcgagaacaagtcacgg
atagttcttgtgcatacaacatcaggatacaagcatagtttgagagaggttttggatgcc
cctaatgtgatgaatatgataaaagatactaaagcagcacaagagattcgagctctcaag
gattttttcgacatgctttcaaatgatccttctcgtgcttgctatggaccaaagcacgtt
gaggttgcccatgaacgattggctatccaaacacttctccttacagatgaacttttcagg
aattctgatgtagcaacaaggaaaaaatatgccaatttggttgattcagtgaaggattca
gggggcactgttcatattttttcatctttgcatgtctcaggagaacaactggcgacgata
actggcattgcagcaatccttcgcttcccactgcccgaccttgaagacatagagatgtga
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