KEGG   Quercus lobata (valley oak): 115988405
Entry
115988405         CDS       T07350                                 
Name
(RefSeq) ras-related protein RHN1-like isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo04144  Endocytosis
qlo04145  Phagosome
qlo04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115988405
   04145 Phagosome
    115988405
   04148 Efferocytosis
    115988405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:qlo04131]
    115988405
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:qlo04147]
    115988405
   04031 GTP-binding proteins [BR:qlo04031]
    115988405
Membrane trafficking [BR:qlo04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    115988405
 Endosome - Lysosome transport
    115988405
Exosome [BR:qlo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115988405
  Exosomal proteins of other body fluids (saliva and urine)
   115988405
  Exosomal proteins of colorectal cancer cells
   115988405
  Exosomal proteins of bladder cancer cells
   115988405
GTP-binding proteins [BR:qlo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    115988405
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase Gtr1_RagA TsaE CPT AAA_16 MMR_HSR1 AAA_22 AAA_24 ATPase
Other DBs
NCBI-GeneID: 115988405
NCBI-ProteinID: XP_030967816
LinkDB
Position
5:complement(23418158..23422672)
AA seq 200 aa
MAKPGNKIIQAKLVLLGDMGTGKTSLVLRFVKGQFFDNQEPTIGAAFFTQILSLAEATVK
FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDISSMDTFTRAKKWVQELQRQGNQNLVMAL
VGNKSDLEAKREVETEEGDQFAQENGMLFIETSAKTSQNINDLFYEIAKRLAKANPAKSS
AMHLNNETQDKRRKILCCSV
NT seq 603 nt   +upstreamnt  +downstreamnt
atggccaaacctggcaacaagattatacaagccaagctggtgcttctaggagacatggga
actgggaagaccagtttagtcttaagatttgtcaaaggccagttttttgataatcaggaa
ccgaccattggagcagcatttttcactcagatactatccttggctgaagccacggtaaag
tttgatatatgggatacagcaggacaagagagatatcatagcttggctcctatgtattat
cggggtgcagcagcagctgtagttgtgtatgacatatcaagcatggatacatttactcga
gctaaaaaatgggttcaagaactgcaaagacaaggaaatcaaaatctggtgatggcattg
gttggaaacaaatctgacttggaagcaaagagagaggttgagactgaggagggggaccaa
tttgctcaagaaaatgggatgcttttcattgaaacatctgcgaaaacttcacagaacatc
aacgatctcttctatgaaatagcaaaaagactagcaaaagcaaaccccgcaaagtcaagt
gcgatgcatctaaacaatgaaactcaagataaaagaagaaaaatactttgttgttcagtt
tga

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