Quercus lobata (valley oak): 115988449
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Entry
115988449 CDS
T07350
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115988449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115988449
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115988449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
115988449
NCBI-ProteinID:
XP_030967880
UniProt:
A0A7N2LU13
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Position
5:69048635..69054163
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AA seq
476 aa
AA seq
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MEMEPGKLFIGGISWDTNEDRLRQYFQCFGEVVEAVIMKDRATGRARGFGFVVFVDPTVA
ERVVMEKHMIDGRTVEAKKAVPRDDQNILNRNNSSIQGSPGPARTKKIFVGGLASTVTES
DFKKYFDQFGTITDVVVMYDQNTQRPRGFGFITFDSEEAVENVLYKTFHELNGKLVEVKR
AVPKELSAGPSRGQLSGHNYGLSRVSLLNGYNQGYNPSSVGGYGLRLDGRFSPVTIGRSG
FPPFSPGYGTGPNIEPGLSPNYGGNANLSSNLGFGQGSNPLYSGNSNRNVNPIGYGGGNG
GNNSMLSSSSRTLWGNGSLNYATNATNPSALLGSGSANSRIGPFDNIGALWSSSLNSGIG
GGAGSTYGSGSLSYGSGEINFGSGGVAYGRNSGTSVAPASSYAASKGSYNGASEEIYEGL
FYGEPTWQSSFSELEGSDSFGYGFGNAASDVLSKNSGGYVGGYSVNNRQSNRGIAA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagcctggcaagcttttcattggtgggatatcttgggacacaaatgaagac
cgtcttagacagtatttccagtgttttggagaagtagtggaagctgtgataatgaaggat
cgggctacgggtcgtgctcgtggtttcggttttgttgtttttgtagaccctactgttgca
gaaagagttgttatggaaaagcatatgatcgatgggagaaccgttgaagcaaaaaaagct
gtccctagagatgatcagaacattctgaacagaaacaatagcagcattcaagggtctcct
ggtcctgctcgcacaaagaagatttttgtgggaggcttagcatccactgtcactgagagt
gattttaagaagtactttgatcaatttgggacaattacagatgtggtggtgatgtatgac
caaaatacacaaaggcctagaggatttgggttcattacattcgactctgaggaagcagtg
gaaaatgtgttgtacaaaacttttcatgaactcaatggtaaactggttgaagttaaacga
gctgtcccaaaagaattatctgcagggccaagtcggggccaattgagtggacataactat
ggtctgagtagagttagcctccttaatggttacaatcagggatacaatccaagctcagtt
ggggggtatggacttagattggatggtagatttagtccagttacaattggtcgtagtgga
tttcctccattcagtcctggatatggaacaggaccaaatattgagcccgggttgagtcca
aactacgggggaaatgcaaacctcagttctaatcttggctttggacagggatcaaaccct
ttatatagtggaaattcaaataggaatgttaaccccattgggtatggtgggggcaatgga
ggaaataattcaatgttaagttcatcaagccgtacactgtgggggaatgggagtcttaat
tatgctactaatgccacaaatcctagtgctttactaggctctggaagtgcaaattctaga
ataggtccttttgacaatattggagcactttggagttcctctcttaactcaggtataggt
ggaggtgctggttcaacctatggtagtggcagtcttagttatggcagtggagaaatcaat
tttggttcaggaggggttgcgtatggaagaaacagtggaaccagtgttgcaccagcatca
tcatatgctgcatcaaagggtagttacaatggggcttctgaagaaatttatgaaggtctg
ttttatggggagcctacttggcaatcatcattttcagagctagagggttctgactcattt
ggttatgggtttggaaatgcagcttcagatgttttaagtaaaaactctggtggttatgtt
ggtggttatagtgttaacaatagacaatcaaatagaggaattgctgcctag
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