KEGG   Quercus lobata (valley oak): 115988469
Entry
115988469         CDS       T07350                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03083  Polycomb repressive complex
qlo04120  Ubiquitin mediated proteolysis
qlo04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115988469
   04120 Ubiquitin mediated proteolysis
    115988469
  09126 Chromosome
   03083 Polycomb repressive complex
    115988469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:qlo04131]
    115988469
   04121 Ubiquitin system [BR:qlo04121]
    115988469
   03036 Chromosome and associated proteins [BR:qlo03036]
    115988469
Membrane trafficking [BR:qlo04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    115988469
Ubiquitin system [BR:qlo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     115988469
   Cul7 complex
     115988469
Chromosome and associated proteins [BR:qlo03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     115988469
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     115988469
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 115988469
NCBI-ProteinID: XP_030967903
LinkDB
Position
5:62674565..62675357
AA seq 184 aa
MSNTSENPNPSSSSAKMTLKTSDNELFEVEEAVAMKFCTVKQYFEDEKDSDVAARGSTTV
IPLPNVHSAVLTMLISYGKKLPQSNAVADNHEEEETKKKERKKYEQGLLKNLMPGELLDL
ISAANYLDFKEGLEFFNQALADHIQNKSVEYVRKFFGIKNDYEPHEEEKYREEYAWAFEG
VDED
NT seq 555 nt   +upstreamnt  +downstreamnt
atgtcgaacactagcgaaaacccaaaccccagttcatcttcagccaaaatgaccctaaaa
acctcagacaacgaactattcgaggttgaagaagccgtggccatgaaattctgcaccgtc
aagcaatactttgaagacgagaaagacagcgatgtggccgcgcgtggctccaccaccgtc
atccctctcccaaacgttcacagtgccgtcctcaccatgctcatctcctacggcaagaaa
cttccccagagcaatgccgtcgcagacaaccatgaggaggaagagacgaagaagaaagag
aggaagaaatacgagcaagggttgttaaagaacctgatgcctggggaactcctagaccta
atatctgctgctaactatttggacttcaaggaagggctggagttcttcaaccaggccttg
gctgatcacatccagaacaagagcgttgagtatgttcggaagttctttggtatcaagaac
gattacgagccccacgaggaggagaagtatcgcgaagaatatgcttgggctttcgaggga
gtcgatgaggattag

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