Quercus lobata (valley oak): 115988705
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Entry
115988705 CDS
T07350
Name
(RefSeq) YTH domain-containing protein ECT4 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115988705
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115988705
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
DUF3942
U79_P34
Motif
Other DBs
NCBI-GeneID:
115988705
NCBI-ProteinID:
XP_030968167
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All DBs
Position
5:85501778..85509239
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AA seq
662 aa
AA seq
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MAASPDRTADSTKSLSILIMDAEEKPAEPDSKKEQPHSVKSERPVSPNASQDATAIVHPR
DAAAQAGSLASGGDHSVYPPNVYAPQAQPFYYRGYDNASGEWDEYPPYVNAEGLEIGSPG
VYNDNPSLLFHSGYGYNPQMPYGPYSPVTTPLPSVGGDAQLYSPQQFPFSGPPYYQQLVP
PSMPYLTSPTQVSQPELASLVSLDQQGDSMVFGQRPGYPPVGSFGRANFPGSPGGLNFHD
AQHGIDGLRSGGIWSDWSKPSDRQRSLMPFSPAVSPQPIGPHGSFGQNIGMPSQQQRSLY
GFGSGPNSYNRGYLPSGFNQGSSFGSASISSLGSNGRSWLSLENSRRHLRGSASLCSCNG
TPDILSEQNRGPRASKPKSQITADNNSSVDNNKLSLKLHDGLYNRPDFVTEYKDAKFFII
KSYSEDNVHKSIKYSVWASTPNGNRKLDAAYREAKEKQDTCTVFLFFSVNASAQFCGVAE
MVGPVDFDKSVTYWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEV
RLEQGIEMLNIFKNYETDMSILDDFDYYEDRQKAMQERKARQQAGLMAVGVVGDNEHRNS
VALSGDFIKQMSKSFAQVVRMEEGSKEVPLTERATSASDGSMGARVLLEDSLPAVVSSAH
AS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaagtccagatcgtacagctgactctactaagtcactgagcatactgatcatg
gatgcagaagagaaacctgccgaaccggatagcaagaaggaacagcctcattctgtgaaa
agtgagaggccagtttctcctaatgcttcccaggatgctaccgctatagtccatccaagg
gatgctgctgctcaagctggatctttggcttcaggtggagatcactctgtttacccacca
aatgtctatgctccccaagctcagcccttctactatcgaggttatgacaatgccagtggt
gaatgggatgaatatcctccatatgtcaatgctgagggactggaaatcggatctcctggt
gtctacaatgataatccttctcttctgttccattctggatatggctacaatccacaaatg
ccatatggaccatattccccggtcacaacacctttgccttctgtaggtggagatgcacag
ttatactccccccagcaatttccattctccgggccaccttattaccagcagttagttcct
cctagcatgccatatcttacttcaccaactcaagtttcacagccagagcttgccagctta
gtaagccttgatcaacaaggcgatagcatggtttttggacaaaggcctggttatcctcct
gtgggatcctttggtagagccaattttcctggaagtcctggtggtctgaattttcatgat
gctcagcatggtattgatgggttaagatctggaggaatttggtcagattggtctaaacct
tcagacaggcagaggtctttgatgccattctcaccagcagtatcaccacagcctattggc
cctcatggctcatttggacagaatattggaatgccctctcaacagcaaagatcattgtat
gggtttggatctggtccaaactcctataatagaggttatttgcccagtggtttcaatcag
ggctcaagctttgggagtgcatccatttccagtttgggatcaaatggtcgaagctggctt
tcacttgaaaatagcagaagacatctcaggggcagtgcttctctgtgcagttgtaatggt
actcctgatatccttagtgagcagaatcgaggaccaagagcctcaaagccaaagagtcaa
attacagctgacaataattcttctgttgacaataataagcttagcctcaagctccatgac
ggtttatacaacaggccagattttgtcacagagtacaaggatgctaagttcttcatcatt
aaatcttacagcgaagataatgttcacaagagtataaaatatagtgtttgggccagtaca
ccaaatgggaatagaaaattagatgctgcttatcgtgaagctaaggagaagcaagatact
tgcacggtctttctattcttttcggtgaatgccagtgctcagttctgtggggtggctgaa
atggttggacctgtcgattttgacaagagtgtaacttactggcagcaagataaatggagt
gggcagtttcctgtcaaatggcatataatcaaagatgtccctaatagtcagtttcgtcac
attgtacttgaaaacaatgacaacaagcctgtaactaacagtcgagacacccaggaggtg
agattggagcagggtattgagatgttgaatattttcaagaattatgaaactgatatgtcc
attctggatgattttgattactatgaagaccggcagaaagccatgcaagaaaggaaggcc
agacagcaagctggcctgatggctgtcggagtagttggagacaatgagcacagaaattct
gttgctttatccggtgatttcatcaagcagatgtcaaagagttttgctcaagttgttcga
atggaggagggtagtaaagaagtccccctcacggagcgagctacttctgcctcagatggc
tcgatgggtgccagagtcttacttgaagattctcttccagcagtcgtctcttctgctcat
gccagttag
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