Quercus lobata (valley oak): 115988739
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Entry
115988739 CDS
T07350
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115988739
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
115988739
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
115988739
NCBI-ProteinID:
XP_030968217
UniProt:
A0A7N2R4Y2
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Position
5:46950604..46952527
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AA seq
548 aa
AA seq
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MSGCCKHCRSNSIVHDDTSANLFCSSCGLVSEFDGYDAQIGGLNGPEGTFVRVGTSGTGT
QYSYKETKIYNAQNLIDDIVYKFALSPSKSSDIKTMIAQITENEFGQGHWFPILIGACAY
IVMRKDNKSLPIAEVASVVGCDIYELGRMFVRVVDFLGLKGSEEFPEFDIVVAFERALRN
CGKFSGLGRDVVERMRKQGVFLIQCAVQWFLTTGRKPLPVVAAVLVLVAELNEVDLRIED
VAPEVHAAVSTCRSRYKELLESLVKVAQVLPWGKDVTVKNVVRNAPFVIQYMERKSMGKR
GEKRKGVEEEEEKGGGIDLGDAVTESLRKNVDHGTSGNSVENDSLYFMAEENRGFVRSGG
ESFDQMKISHECLSLMYTEFLNEMGHEKFMEGSGEVPQRKGMRGFEFLACRDWWEGKSEL
SKKLLLKQILEKDVGLDALPPSFVNGCKVYKRRKEKINAAKLRINRIKHPLGTDLVESGD
IGLSECVNAGKKRKRKRVKDIDWEDFIIEALLLHEVKEEEIEKGHYNTLLDLHVFNGGIL
PEVPVWKA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctgctgcaaacactgccgcagcaattccattgtccacgacgacacctcggcg
aacctgttctgctcctcgtgcggcctcgtctcagaattcgacggttacgatgcccagatc
ggaggtctcaacggcccagaaggcacctttgtccgtgtcggcacttcaggtacgggcact
caatactcttacaaagaaaccaaaatctacaatgcccaaaacctcattgatgacattgtc
tacaagttcgctttatctccttccaaatctagtgacatcaagactatgattgcccaaata
accgaaaacgagttcggtcaagggcattggttcccaattctaataggggcttgtgcttat
attgttatgcgaaaagataacaagtctttgcccattgccgaggtggcttcggttgtagga
tgtgacatttatgaattaggtaggatgtttgtgcgtgtggtggattttttgggcttaaaa
gggtcagaagagtttccggagtttgatattgttgtggcgttcgagagggcattgaggaat
tgtggaaagttttcggggttgggaagggatgttgttgagagaatgcggaaacagggtgtt
tttttgatacaatgtgcggtgcagtggttcttgacgacgggtaggaagccgttgccagtg
gtggcggccgtgttggttctggtggcggagttgaatgaggtggatttgaggattgaggat
gtggcgccggaggttcatgctgcggtgtcaacgtgtaggtcgaggtataaggagttgttg
gaatcacttgtgaaggttgcacaagtgttgccctgggggaaggatgttacggttaagaat
gttgttaggaatgcgccgtttgtgattcagtatatggagaggaagtcgatggggaagcgt
ggtgagaagaggaagggggtagaggaggaggaggagaagggtggtgggattgatttagga
gatgcggtgactgagagtttgaggaaaaatgttgaccatggtaccagtgggaattctgtg
gaaaatgattctctgtattttatggctgaagagaatagggggtttgtaagatctgggggt
gagtcttttgatcagatgaagatttcccatgaatgtttatcattgatgtacactgaattt
ttgaatgagatgggtcatgaaaagtttatggaagggagtggtgaggttcctcaaagaaaa
gggatgagagggtttgagttccttgcatgtagggattggtgggagggaaaatcggagctg
agcaaaaagcttttactcaagcaaatattggagaaagatgtaggattagatgctctgccg
ccatcatttgttaatggttgcaaggtttataagagaaggaaagaaaagataaatgctgct
aagttgcgaatcaatagaattaagcatccattaggaactgatttggttgagagtggtgat
attggcctttcagaatgtgtaaatgctgggaagaagagaaagagaaaacgagttaaagat
attgattgggaagattttatcattgaagctcttctcctccatgaagtgaaagaggaggaa
attgagaaagggcattacaataccttgctggacttgcatgtgtttaatggaggaattttg
ccagaggttcctgtgtggaaggcatga
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