Quercus lobata (valley oak): 115988767
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Entry
115988767 CDS
T07350
Name
(RefSeq) coatomer subunit beta'-2-like
KO
K17302
coatomer subunit beta'
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115988767
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qlo04147
]
115988767
Membrane trafficking [BR:
qlo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
115988767
Exosome [BR:
qlo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115988767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_RFWD3
TPR_1
Beta-prop_WDR35_TULP_N
WD40_like
TPR_2
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Beta-prop_SPT8
HEAT_GCN1
WD_LRWD1
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
115988767
NCBI-ProteinID:
XP_030968244
LinkDB
All DBs
Position
5:24865219..24878146
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AA seq
918 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWLLASLYSGTVCIWNYQSQTMAKSFEVTELPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMKGSRRVVIGYDEGTIMVKLG
REEPVASMDNSGKIIWAKHNEIQTVNIKSVVADLEVADGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFAWSTEGEYAVRESTSKIKIFSKTFQ
EKRSVRPTFSAEHIYGGALLAMCSNDFICFYDWAECRMIRRIDVNVKNLHWADSGDLVAI
ASDTSFYILKYNRDVVSSYLDSGRPVDEQGVEDAFELLHEVNERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLVSLIEYKTLVM
RGDLERASEVLPSIPKEHHNSVARFLESRGMIEDALEVATDPDYRFELAIQLGRLEVAKG
IASEVQSESKWKQLGELAMSSGKLDMAEECLKRAMDLSGLLLLYSSLGDAEGISQLASLA
KEQGKNNVAFLCLFMLGKLEECLELLLESNRIPEAALMARSYLPSKVSEIVAIWRKDLNK
VNPKAAESLADPEEYPNLFEDWQVALSVESKVTESRGVYPPAEEYINHADRSHLTLVEAF
RNMQVDDEEPLENGDADHENGEEQNAEELNAEELDAEEQNGEEESQEEAVVVDADSTDGA
VLVNGNEAEQEWVLTPHQ
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcaggctcgaaatcaagagaaagcttgctcaaagatcagagagagtgaagtcc
gtggatctgcatccaacagagccatggcttctagcgagtttgtattcgggaactgtttgt
atctggaactatcaatctcagactatggcgaagtcttttgaggtgacagagttaccagtt
aggtcagccaagtttatagcacgcaagcaatgggttgttgctggagctgatgacatgttc
attcgtgtatacaattacaacacaatggataaggtaaaagtatttgaagcacacacggac
tacattaggtgtgtggctgtacatcctacccttccgtatgtgctgtcatcatctgatgat
atgctcataaagctttgggattgggagaaaggttgggtgtgtactcagatttttgagggg
cattcccattatgtgatgcaagtgacgtttaatccaaaagataccaacacatttgccagt
gcatcgcttgaccgcaccataaagatttggaatcttggctcccccgatccaaattttaca
ttggatgcccatcagaaaggtgttaactgtgtcgattactttactggtggtgataagcca
tacctaattactggttctgatgatcacactgctaaggtgtgggattatcagaccaaaagc
tgtgtccagactctggaaggccacacacacaatgtctctgcagtatgttttcatccagaa
cttccaataataattactggttctgaagatgggactgttcgtatatggcattctaccact
tataggcttgagaacacattgaattatggtctagaaagagtgtgggctattggatacatg
aaaggctcacgccgggttgtgattggttatgatgaaggaaccatcatggtgaaacttggt
agagaagaacctgtagctagtatggacaacagcggaaaaatcatttgggctaagcataat
gaaattcaaaccgtgaacattaagagtgtggttgcagatttggaggttgctgatggagaa
agattgcctttggcagttaaggagttgggaacatgtgatctttacccacagagcttaaag
cacaatcccaatgggaggtttgttgttgtttgtggagacggtgaatacattatatataca
gctttggcatggaggaatagatcattcggttcggctttggaatttgcttggtcaacagaa
ggagaatatgctgttagagaaagcacatcaaagataaagattttcagtaaaactttccag
gaaaagaggagcgtgcgtccaaccttttcagctgagcacatatatgggggagctttattg
gcaatgtgctcaaatgattttatttgtttttatgattgggctgaatgcaggatgattcgg
cgaattgatgttaatgtgaaaaacctccattgggctgacagtggagatctagtggcgatt
gccagtgatacgtcattctacatcctgaaatacaatcgtgatgtagtttcttcttatttg
gatagtgggagacctgtagatgaacaaggtgttgaagatgcctttgagcttctccatgaa
gtgaatgaacgtgtcagaactggtatatgggttggggattgtttcatttacaacaattcc
tcctggaggcttaattactgtgttggtggtgaggtaaccacaatgtttcatttggatcgg
cccatgtatttgttgggctatcttgctagtcaaagtagggtttatctgattgacaaagaa
ttcaatgttatggggtacacattacttgttagcttgattgagtacaagactcttgtgatg
cgtggggatctggaaagggccagtgaagtcttgccttcaattcctaaagagcatcataat
agtgtggctcgtttcttggaatcacgtggaatgatagaggatgctcttgaagtagctaca
gaccctgattacagatttgagctagccatacagcttggtagattagaggttgcaaagggt
attgcgtcagaagtgcagagtgagtctaaatggaagcagttgggagaattagctatgtcc
agtggaaagttagatatggccgaggaatgtttaaagcgtgcaatggacttgagtgggttg
ttactgctctattcttctttaggtgatgctgaggggatatcacaacttgcatcacttgct
aaagagcaggggaagaacaatgttgcattcctttgcttattcatgttgggtaaattggaa
gagtgccttgagcttttgttggaaagcaaccggatacctgaggcggccttgatggcacga
tcttatcttccaagcaaggtctcagagatagttgcaatttggagaaaagacctaaataag
gttaatccaaaagctgctgaatctttagctgatcccgaggagtatcctaatttgtttgaa
gattggcaagtcgctctttctgttgaatccaaagtcacagagtcaaggggtgtttatcct
cctgcagaagaatatataaaccatgccgacagatcacatcttacacttgtggaggctttc
agaaacatgcaagtagatgatgaggaaccccttgaaaatggagatgcagatcatgagaat
ggagaagaacagaatgcagaggagctgaatgcagaggaactggatgcagaggaacaaaat
ggagaagaagagagccaagaggaggctgtcgtagtggatgcagattcaacagatggtgca
gtactcgttaatggtaacgaggctgaacaagagtgggtgcttacgccacatcagtag
DBGET
integrated database retrieval system
