Quercus lobata (valley oak): 115988954
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Entry
115988954 CDS
T07350
Name
(RefSeq) oligouridylate-binding protein 1B isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115988954
03041 Spliceosome [BR:
qlo03041
]
115988954
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
115988954
Spliceosome [BR:
qlo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115988954
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_PARP14_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
115988954
NCBI-ProteinID:
XP_030968450
UniProt:
A0A7N2LJP8
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Position
5:complement(3764141..3771991)
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AA seq
423 aa
AA seq
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MQQQQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGN
IQTQVTEPLLQEVFASTGPVESCKLIRKEKSSYGFIHYFDRRSAAFAILHLNGRHLFGQP
IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSR
GFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWATKGAVSNEDKQSSDAKSVVELTNGS
SEDGKETTNSDAPENNPQYTTVYVGNLASEVTQLDLHRHFHALGAGVIEEVRVQRDKGFG
FVRYSTHAEAAMAIQMGNAHSYVCGKQIKCSWGSKPTPPGTASNPLPPPAAAPIPGLSAT
DLLAYERQLAMSKMGGVHALMHPQGQHPLKQAAMGMGAAGASQAIYDGGFQNVAAAQQLM
YYQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcagcagaggctgaagcagcagcaacaagctttgatgcagcaagctcttctt
caacaacagtctctctaccaccccggtctcctagctcctcctcagattgagccaattcca
agtggaaatctgcctcctggttttgatccaagtacttgccgcagtgtttatgtgggaaac
atccagacacaagtaacagaaccactactccaagaagtttttgcgagtactggtcctgtt
gaaagctgcaagcttattagaaaggagaagtcatcctatgggtttattcactatttcgat
cggagatcagctgcttttgctatattacatctgaatggaaggcatctgtttgggcagcct
atcaaagttaattgggcatatgctagtggtcagagggaggatacatcaggtcacttcaac
atttttgtgggtgatctcagtcctgaggttacagatgctacattgtttgcctgcttttct
gtttatcccagttgttcagatgcaagggttatgtgggatcagaagactgggcggtcaaga
gggtttggatttgtttctttccgaagtcaacaggatgcccaaagtgccataaatgaccta
actggaaagtggcttggcagtagacagatacgctgtaactgggccactaaaggtgctgtt
tccaatgaagacaagcagagttcagatgccaaaagcgtggtagaactaacaaatggctca
tcggaagatggcaaagagacaacaaatagtgacgctcctgagaacaaccctcagtatacc
actgtttatgtgggcaatcttgcttcagaggttacccagctcgatctgcatcgccacttc
catgctcttggtgcaggagtgattgaggaggttcgggtccagcgggataaaggctttggt
tttgtgagatacagtactcatgccgaggcagccatggctattcagatgggaaatgcgcac
tcatatgtctgtggcaaacaaattaagtgctcttggggtagtaaacctacgccgcctgga
acagcttcaaacccactccccccacctgcagctgcccccattcctggcctctcagcgact
gatcttttggcctacgaacggcaattagcaatgagcaaaatgggtggtgttcatgccctc
atgcaccctcaggggcagcatcctctcaaacaggcagcaatgggaatgggtgccgccgga
gccagccaggctatatatgatggtgggttccagaatgttgctgctgcccagcagctcatg
tactaccagtaa
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